Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.333357
Cecr2
cat eye syndrome chromosome region, candidate 2 homolog (human)
6
6 54.0 cM
330409
Mm.333357
Gtl4
gene trap locus 4
6
14895
Gene Ontology
nuclear euchromatin
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTCAAGTCA
(
3
)
4.9
0.0049
P8 Cb GC
TGCCTTTTTT (
5
)
4.9
0.0049
P8 Cb GC
GAGGAGGAGG (
35
)
1.6
0.0016
P8 Cb GC
GGCCTGTCAG
(
2
)
1.6
0.0016
P8 Cb GC
GTCTGCTGGT
(
3
)
1.6
0.0016
P8 Cb GC
GTGGCACAGG (
10
)
1.6
0.0016
Cb medulloblastoma
TGCCTTTTTT (
5
)
2.3
0.0023
P8 GC+1d culture
GGCCTGTCAG
(
2
)
2.3
0.0023
P8 GC+1d culture
ACTCAAGTCA
(
3
)
1.1
0.0011
P8 GC+1d culture
GTGGCACAGG (
10
)
1.1
0.0011
P8 GC+1d culture
TGCCTTTTTT (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCCTTTTTT (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTCAAGTCA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGAGGAGG (
35
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCTGTCAG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCTGCTGGT
(
3
)
1.2
0.0012
3T3 fibroblasts
GAGGAGGAGG (
35
)
3.5
0.0035
3T3 fibroblasts
GTGGCACAGG (
10
)
3.5
0.0035
E15 cortex
GAGGAGGAGG (
35
)
4.9
0.0049
E15 cortex
GGCCTGTCAG
(
2
)
4.9
0.0049
P1 cortex
GAGGAGGAGG (
35
)
4.5
0.0045
Hypothalamus
GAGGAGGAGG (
35
)
7.2
0.0072
Hypothalamus
ACTCAAGTCA
(
3
)
1.8
0.0018
Hypothalamus
TGCCTTTTTT (
5
)
1.8
0.0018
Hypothalamus
TGGGGCTGGG (
10
)
1.8
0.0018
E12.5 retina
GAGGAGGAGG (
35
)
1.9
0.0019
E12.5 retina
GTGGCACAGG (
10
)
1.9
0.0019
E14.5 retina
TGCCTTTTTT (
5
)
3.6
0.0036
E14.5 retina
ACTCAAGTCA
(
3
)
1.8
0.0018
E14.5 retina
GTCTGCTGGT
(
3
)
1.8
0.0018
E14.5 retina
GTGGCACAGG (
10
)
1.8
0.0018
E16.5 retina
TGCCTTTTTT (
5
)
3.6
0.0036
E18.5 retina
GTGGCACAGG (
10
)
3.6
0.0036
E18.5 retina
TGCCTTTTTT (
5
)
3.6
0.0036
P0.5 retina
GTGGCACAGG (
10
)
5.9
0.0059
P0.5 retina
TGCCTTTTTT (
5
)
3.9
0.0039
P0.5 retina
ACTCAAGTCA
(
3
)
2
0.002
P0.5 retina
GGCCTGTCAG
(
2
)
2
0.002
P0.5 retina
TTCAATGTAG
(
2
)
2
0.002
P2.5 retina
ACTCAAGTCA
(
3
)
1.8
0.0018
P2.5 retina
GAGGAGGAGG (
35
)
1.8
0.0018
P2.5 retina
GTGGCACAGG (
10
)
1.8
0.0018
P2.5 retina
TGCCTTTTTT (
5
)
1.8
0.0018
P4.5 retina
GGCCTGTCAG
(
2
)
4
0.004
P4.5 retina
GAGGAGGAGG (
35
)
2
0.002
P4.5 retina
GTGGCACAGG (
10
)
2
0.002
P6.5 retina
TGCCTTTTTT (
5
)
3.3
0.0033
P6.5 retina
ACTCAAGTCA
(
3
)
1.7
0.0017
P6.5 retina
GTGGCACAGG (
10
)
1.7
0.0017
P6.5 retina
TTCAATGTAG
(
2
)
1.7
0.0017
P6.5 retina
TTGATTTAAA
(
3
)
1.7
0.0017
P10.5 crx- retina
TGCCTTTTTT (
5
)
3.7
0.0037
P10.5 crx- retina
ACTCAAGTCA
(
3
)
1.9
0.0019
P10.5 crx- retina
GAGGAGGAGG (
35
)
1.9
0.0019
P10.5 crx- retina
GTGGCACAGG (
10
)
1.9
0.0019
P10.5 crx- retina
TTGATTTAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTGGCACAGG (
10
)
9.6
0.0096
P10.5 crx+ retina
GGCCTGTCAG
(
2
)
3.8
0.0038
P10.5 crx+ retina
GTCTGCTGGT
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGCCTTTTTT (
5
)
3.8
0.0038
P10.5 crx+ retina
TTCAATGTAG
(
2
)
1.9
0.0019
Adult retinal
GTGGCACAGG (
10
)
11.1
0.0111
Adult retinal
GTCTGCTGGT
(
3
)
5.6
0.0056
Adult retinal
GAGGAGGAGG (
35
)
3.7
0.0037
Adult retinal
GGCCTGTCAG
(
2
)
1.9
0.0019
Adult retinal
TGCCTTTTTT (
5
)
1.9
0.0019
ONL
TGCCTTTTTT (
5
)
5.7
0.0057
ONL
TGGGGCTGGG (
10
)
3.8
0.0038
ONL
ACTCAAGTCA
(
3
)
1.9
0.0019
ONL
GAGGAGGAGG (
35
)
1.9
0.0019
ONL
GTCTGCTGGT
(
3
)
1.9
0.0019
ONL
GTGGCACAGG (
10
)
1.9
0.0019
