Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.333594
5430402M21Rik
RIKEN cDNA 5430402M21 gene
7
71337
Mm.333594
BC057627
cDNA sequence BC057627
7
330474
Human Homolog
C19orf7[chromosome 19 open reading frame 7]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 24 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTCTCTTA
(
2
)
8.2
0.0082
Cb medulloblastoma
TGGTCTCTTA
(
2
)
2.3
0.0023
P8 GC+1d culture
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
11.4
0.0114
P8 GC+SHH+1d culture
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
14.1
0.0141
3T3 fibroblasts
AGGGTCTTCG
(
2
)
3.5
0.0035
E15 cortex
TGGTCTCTTA
(
2
)
4.9
0.0049
P1 cortex
TGGTCTCTTA
(
2
)
9.1
0.0091
E12.5 retina
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
11.3
0.0113
E14.5 retina
TGGTCTCTTA
(
2
)
1.8
0.0018
E16.5 retina
TGGTCTCTTA
(
2
)
3.6
0.0036
E18.5 retina
TGGTCTCTTA
(
2
)
3.6
0.0036
P0.5 retina
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
7.9
0.0079
P2.5 retina
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
17.6
0.0176
P4.5 retina
TGGTCTCTTA
(
2
)
9.9
0.0099
P6.5 retina
TGGTCTCTTA
(
2
)
10
0.01
P10.5 crx+ retina
TGGTCTCTTA
(
2
)
5.8
0.0058
Adult retinal
AGGGTCTTCG
(
2
)
TGGTCTCTTA
(
2
)
3.8
0.0038
ONL
TGGTCTCTTA
(
2
)
11.5
0.0115
