Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33376	Shoc2	soc-2 (suppressor of clear) homolog (C. elegans)	19		56392
Human Homolog	SHOC2[soc-2 suppressor of clear homolog (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAGCATCC (3) 1.6 0.0016 Cb medulloblastoma AGTAGTAGTT (2) CTCAGCATCC (2) 4.6 0.0046 P8 GC+1d culture AGTAGTAGTT (2) CCCAGCATCC (3) CTCAGCATCC (2) GACTCTTTGA GTCTGATAGA GTTTCTCAAA (2) 7.8 0.0078 P8 GC+SHH+1d culture CCCAGCATCC (3) CTCAGCATCC (2) GACTCTTTGA GTCTGATAGA 4.8 0.0048 P1 cortex AGTAGTAGTT (2) GTTTCTCAAA (2) 9 0.009 E14.5 retina GAAAAGGAGA GACTCTTTGA 5.4 0.0054 E16.5 retina AGTAGTAGTT (2) CCCAGCATCC (3) 3.6 0.0036 E18.5 retina AGTAGTAGTT (2) 1.8 0.0018 P2.5 retina CCCAGCATCC (3) 1.8 0.0018 P4.5 retina CCCAGCATCC (3) GTTTCTCAAA (2) 6 0.006 P6.5 retina AGTAGTAGTT (2) CCCAGCATCC (3) GACTCTTTGA 5.1 0.0051 P10.5 crx- retina AGTAGTAGTT (2) CCCAGCATCC (3) 7.4 0.0074 P10.5 crx+ retina AGTAGTAGTT (2) CCCAGCATCC (3) GACTCTTTGA GTCTGATAGA GTTTCTCAAA (2) 11.4 0.0114 Adult retinal CCCAGCATCC (3) 3.7 0.0037