Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333868	Rap1a	RAS-related protein-1a	3	3 48.5 cM	109905
Gene Ontology	GTP binding | GTPase activity | membrane | negative regulation of cell cycle | small GTPase mediated signal transduction
Human Homolog	RAP1A[RAP1A, member of RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AGTCAAAAAA (2) CCTTGCTGAG (3) GAGACAAAGG (4) 208.7 0.2087 Cb medulloblastoma AAAAAAAAAA (2) AGTCAAAAAA (2) CCTTGCTGAG (3) 816.3 0.8163 P8 GC+1d culture AAAAAAAAAA (2) ACAGATATAA ACTCCTCCCT AGTCAAAAAA (2) CCTTGCTGAG (3) 212.2 0.2122 P8 GC+SHH+1d culture AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) GAGACAAAGG (4) 292.7 0.2927 3T3 fibroblasts AAAAAAAAAA (2) 28 0.028 E15 cortex AAAAAAAAAA (2) 212.8 0.2128 P1 cortex AAAAAAAAAA (2) AGTCAAAAAA (2) 249.9 0.2499 Hypothalamus AAAAAAAAAA (2) ACAGATATAA ACTCCTCCCT AGTCAAAAAA (2) GAGACAAAGG (4) 137.6 0.1376 E12.5 retina AAAAAAAAAA (2) AGTCAAAAAA (2) 140.8 0.1408 E14.5 retina AAAAAAAAAA (2) AGTCAAAAAA (2) 105.6 0.1056 E16.5 retina AAAAAAAAAA (2) AGTCAAAAAA (2) CCTTGCTGAG (3) 50.7 0.0507 E18.5 retina AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) 387.4 0.3874 P0.5 retina AAAAAAAAAA (2) ACAGATATAA ACTCCTCCCT AGTCAAAAAA (2) 125.7 0.1257 P2.5 retina AAAAAAAAAA (2) AGTCAAAAAA (2) GAGACAAAGG (4) 339.7 0.3397 P4.5 retina AAAAAAAAAA (2) AGTCAAAAAA (2) 285.3 0.2853 P6.5 retina AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) CCTTGCTGAG (3) GAGACAAAGG (4) 285.2 0.2852 P10.5 crx- retina AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) CCTTGCTGAG (3) 55.8 0.0558 P10.5 crx+ retina AAAAAAAAAA (2) ACAGATATAA ACTCCTCCCT AGTCAAAAAA (2) 105.7 0.1057 Adult retinal AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) GAGACAAAGG (4) 72.3 0.0723 ONL AAAAAAAAAA (2) ACTCCTCCCT AGTCAAAAAA (2) GAGACAAAGG (4) 111 0.111