Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.334284 B930086L07RikRIKEN cDNA B930086L07 gene 7    320030 
 Mm.334284 D930021H04RikRIKEN cDNA D930021H04 gene 7    399575 
 Mm.334284 T25625expressed sequence T25625 7    97432 
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCTTTAATCC (355)52.20.0522
P8 Cb GCTGTGCAAACA (5)11.40.0114
P8 Cb GCCGCCACCACC (12)6.50.0065
P8 Cb GCGCTCTACCAG (3)3.30.0033
P8 Cb GCTTCTATTCAT (6)1.60.0016
Cb medulloblastomaCCTTTAATCC (355)41.60.0416
Cb medulloblastomaAAAGGAAAAA (15)6.90.0069
Cb medulloblastomaCGCCACCACC (12)6.90.0069
Cb medulloblastomaGAACAGTGTG (8)2.30.0023
P8 GC+1d cultureCCTTTAATCC (355)320.032
P8 GC+1d cultureTTCTATTCAT (6)4.60.0046
P8 GC+1d cultureCGCCACCACC (12)2.30.0023
P8 GC+1d cultureTGTGCAAACA (5)2.30.0023
P8 GC+1d cultureGAACAGTGTG (8)1.10.0011
P8 GC+1d cultureGCTCTACCAG (3)1.10.0011
P8 GC+SHH+1d cultureCCTTTAATCC (355)25.80.0258
P8 GC+SHH+1d cultureGAACAGTGTG (8)9.40.0094
P8 GC+SHH+1d cultureCGCCACCACC (12)5.90.0059
P8 GC+SHH+1d cultureTGTGCAAACA (5)4.70.0047
P8 GC+SHH+1d cultureGCTCTACCAG (3)3.50.0035
P8 GC+SHH+1d cultureAAAGGAAAAA (15)1.20.0012
P8 GC+SHH+1d cultureGGGAGTGAGG (4)1.20.0012
P8 GC+SHH+1d cultureTTCTATTCAT (6)1.20.0012
3T3 fibroblastsCCTTTAATCC (355)70.10.0701
3T3 fibroblastsTGTGCAAACA (5)17.50.0175
3T3 fibroblastsCGCCACCACC (12)70.007
E15 cortexCCTTTAATCC (355)54.40.0544
E15 cortexCGCCACCACC (12)14.80.0148
E15 cortexGCTCTACCAG (3)9.90.0099
E15 cortexAAAGGAAAAA (15)4.90.0049
E15 cortexTGTGCAAACA (5)4.90.0049
E15 cortexTTCTATTCAT (6)4.90.0049
P1 cortexCCTTTAATCC (355)154.50.1545
P1 cortexGCTCTACCAG (3)9.10.0091
P1 cortexCGCCACCACC (12)4.50.0045
P1 cortexTTCTATTCAT (6)4.50.0045
HypothalamusCCTTTAATCC (355)19.90.0199
HypothalamusCGCCACCACC (12)3.60.0036
HypothalamusAAAGGAAAAA (15)1.80.0018
HypothalamusAGGAAGGAAG (12)1.80.0018
HypothalamusAGGGAGGGGC (6)1.80.0018
HypothalamusGAACAGTGTG (8)1.80.0018
HypothalamusGCAGCACATA (3)1.80.0018
HypothalamusTGTGCAAACA (5)1.80.0018
E12.5 retinaCCTTTAATCC (355)75.10.0751
E12.5 retinaGAACAGTGTG (8)5.60.0056
E12.5 retinaTTCTATTCAT (6)3.80.0038
E12.5 retinaCGCCACCACC (12)1.90.0019
E12.5 retinaTGTGCAAACA (5)1.90.0019
E14.5 retinaCCTTTAATCC (355)120.30.1203
E14.5 retinaAGGGAGGGGC (6)3.60.0036
E14.5 retinaCGCCACCACC (12)3.60.0036
E14.5 retinaTTCTATTCAT (6)3.60.0036
E14.5 retinaGAACAGTGTG (8)1.80.0018
E14.5 retinaGCGGCCCTCC (5)1.80.0018
E14.5 retinaGGGAGTGAGG (4)1.80.0018
E16.5 retinaCCTTTAATCC (355)68.80.0688
E16.5 retinaGAACAGTGTG (8)7.20.0072
E16.5 retinaCGCCACCACC (12)3.60.0036
E16.5 retinaTGTGCAAACA (5)3.60.0036
E16.5 retinaTTCTATTCAT (6)3.60.0036
E16.5 retinaAAAGGAAAAA (15)1.80.0018
E18.5 retinaCCTTTAATCC (355)23.60.0236
E18.5 retinaCGCCACCACC (12)10.90.0109
E18.5 retinaAAAGGAAAAA (15)3.60.0036
E18.5 retinaGAACAGTGTG (8)3.60.0036
E18.5 retinaGCTCTACCAG (3)1.80.0018
E18.5 retinaTTCTATTCAT (6)1.80.0018
P0.5 retinaCCTTTAATCC (355)72.60.0726
P0.5 retinaGCTCTACCAG (3)7.90.0079
P0.5 retinaCGCCACCACC (12)5.90.0059
P0.5 retinaGAACAGTGTG (8)3.90.0039
P0.5 retinaTGTGCAAACA (5)3.90.0039
P2.5 retinaCCTTTAATCC (355)70.40.0704
P2.5 retinaCGCCACCACC (12)10.60.0106
P2.5 retinaGCTCTACCAG (3)70.007
P2.5 retinaGAACAGTGTG (8)3.50.0035
P2.5 retinaTTCTATTCAT (6)3.50.0035
P2.5 retinaAAGATAAGCA (5)1.80.0018
P2.5 retinaTGTGCAAACA (5)1.80.0018
P4.5 retinaCCTTTAATCC (355)43.60.0436
P4.5 retinaCGCCACCACC (12)7.90.0079
P4.5 retinaTTCTATTCAT (6)5.90.0059
P4.5 retinaAAAGGAAAAA (15)40.004
P4.5 retinaGCTCTACCAG (3)40.004
P4.5 retinaAAGATAAGCA (5)20.002
P4.5 retinaAGGAAGGAAG (12)20.002
P4.5 retinaGAACAGTGTG (8)20.002
P4.5 retinaTGTGCAAACA (5)20.002
P6.5 retinaCCTTTAATCC (355)700.07
P6.5 retinaGCTCTACCAG (3)18.30.0183
P6.5 retinaCGCCACCACC (12)8.30.0083
P6.5 retinaTTCTATTCAT (6)6.70.0067
P6.5 retinaTGTGCAAACA (5)3.30.0033
P10.5 crx- retinaCCTTTAATCC (355)63.20.0632
P10.5 crx- retinaTTCTATTCAT (6)9.30.0093
P10.5 crx- retinaCGCCACCACC (12)1.90.0019
P10.5 crx- retinaGAACAGTGTG (8)1.90.0019
P10.5 crx+ retinaCCTTTAATCC (355)38.40.0384
P10.5 crx+ retinaTTCTATTCAT (6)5.80.0058
P10.5 crx+ retinaGCTCTACCAG (3)3.80.0038
P10.5 crx+ retinaAAAGGAAAAA (15)1.90.0019
P10.5 crx+ retinaAGGAAGGAAG (12)1.90.0019
P10.5 crx+ retinaGAACAGTGTG (8)1.90.0019
Adult retinalCCTTTAATCC (355)129.60.1296
Adult retinalGCTCTACCAG (3)16.70.0167
Adult retinalCGCCACCACC (12)9.30.0093
Adult retinalGAACAGTGTG (8)1.90.0019
Adult retinalGCGGCCCTCC (5)1.90.0019
Adult retinalTTCTATTCAT (6)1.90.0019
ONLCCTTTAATCC (355)84.30.0843
ONLAAGATAAGCA (5)3.80.0038
ONLGCAGCACATA (3)3.80.0038
ONLCGCCACCACC (12)1.90.0019
ONLGAACAGTGTG (8)1.90.0019
ONLGCGGCCCTCC (5)1.90.0019
ONLGCTCTACCAG (3)1.90.0019