Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.334499
2610042L04Rik
RIKEN cDNA 2610042L04 gene
14
67055
Mm.334499
B930046C15Rik
RIKEN cDNA B930046C15 gene
319328
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCATCGTT (
8
)
6.5
0.0065
P8 Cb GC
ATCACACCTG (
7
)
1.6
0.0016
P8 Cb GC
TGTTCTGCTT (
5
)
1.6
0.0016
Cb medulloblastoma
CTGCATCGTT (
8
)
9.2
0.0092
Cb medulloblastoma
ATCACACCTG (
7
)
4.6
0.0046
Cb medulloblastoma
ACCTCCTCAT
(
4
)
2.3
0.0023
P8 GC+1d culture
CTGCATCGTT (
8
)
3.4
0.0034
P8 GC+1d culture
GGTAAGTTTT (
12
)
3.4
0.0034
P8 GC+SHH+1d culture
CTGCATCGTT (
8
)
3.5
0.0035
P8 GC+SHH+1d culture
GGTAAGTTTT (
12
)
3.5
0.0035
P8 GC+SHH+1d culture
ATCACACCTG (
7
)
1.2
0.0012
E15 cortex
CTGCATCGTT (
8
)
19.8
0.0198
E15 cortex
ACCTCCTCAT
(
4
)
4.9
0.0049
E15 cortex
GGTAAGTTTT (
12
)
4.9
0.0049
P1 cortex
CTGCATCGTT (
8
)
22.7
0.0227
P1 cortex
GGTAAGTTTT (
12
)
9.1
0.0091
P1 cortex
ACCTCCTCAT
(
4
)
4.5
0.0045
P1 cortex
ATCACACCTG (
7
)
4.5
0.0045
Hypothalamus
CTGCATCGTT (
8
)
5.4
0.0054
Hypothalamus
ATCACACCTG (
7
)
3.6
0.0036
Hypothalamus
GGTAAGTTTT (
12
)
1.8
0.0018
E12.5 retina
CTGCATCGTT (
8
)
3.8
0.0038
E12.5 retina
GCTGTAATGG (
2
)
1.9
0.0019
E12.5 retina
TGTTCTGCTT (
5
)
1.9
0.0019
E14.5 retina
CTGCATCGTT (
8
)
7.3
0.0073
E14.5 retina
ACCTCCTCAT
(
4
)
1.8
0.0018
E14.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
E16.5 retina
CTGCATCGTT (
8
)
14.5
0.0145
E16.5 retina
ATCACACCTG (
7
)
1.8
0.0018
E16.5 retina
CTGCATCCTT
(
4
)
1.8
0.0018
E18.5 retina
CTGCATCGTT (
8
)
1.8
0.0018
E18.5 retina
GCTGTAATGG (
2
)
1.8
0.0018
E18.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
P0.5 retina
CTGCATCGTT (
8
)
2
0.002
P0.5 retina
GGTAAGTTTT (
12
)
2
0.002
P2.5 retina
ATCACACCTG (
7
)
3.5
0.0035
P2.5 retina
CTGCATCGTT (
8
)
1.8
0.0018
P2.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
P4.5 retina
CTGCATCGTT (
8
)
4
0.004
P4.5 retina
GGTAAGTTTT (
12
)
4
0.004
P6.5 retina
CTGCATCGTT (
8
)
5
0.005
P6.5 retina
ATCACACCTG (
7
)
1.7
0.0017
P10.5 crx- retina
CTGCATCGTT (
8
)
42.7
0.0427
P10.5 crx- retina
GGTAAGTTTT (
12
)
3.7
0.0037
P10.5 crx- retina
ATCACACCTG (
7
)
1.9
0.0019
P10.5 crx- retina
CTGCATCCTT
(
4
)
1.9
0.0019
P10.5 crx- retina
GCTGTAATGG (
2
)
1.9
0.0019
P10.5 crx+ retina
CTGCATCGTT (
8
)
11.5
0.0115
P10.5 crx+ retina
ATCACACCTG (
7
)
5.8
0.0058
P10.5 crx+ retina
CTGCATCCTT
(
4
)
5.8
0.0058
P10.5 crx+ retina
GCTGTAATGG (
2
)
1.9
0.0019
Adult retinal
GGTAAGTTTT (
12
)
3.7
0.0037
ONL
ATCACACCTG (
7
)
1.9
0.0019
