Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.334680
1500041N16Rik
RIKEN cDNA 1500041N16 gene
8
67836
Human Homolog
MGC4238[mitogen-activated protein kinase organizer 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGATCTGTGG (
2
)
4.9
0.0049
P8 Cb GC
CCAGCCCCTC (
5
)
3.3
0.0033
P8 Cb GC
GGAGGCAGCA
(
5
)
3.3
0.0033
Cb medulloblastoma
TAAAGTAATA (
3
)
2.3
0.0023
P8 GC+1d culture
CCAGCCCCTC (
5
)
14.8
0.0148
P8 GC+1d culture
GGAGGCAGCA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AGATCTGTGG (
2
)
7
0.007
P8 GC+SHH+1d culture
TAAAGTAATA (
3
)
7
0.007
P8 GC+SHH+1d culture
CCAGCCCCTC (
5
)
2.3
0.0023
3T3 fibroblasts
CCAGCCCCTC (
5
)
14
0.014
E15 cortex
CCAGCCCCTC (
5
)
4.9
0.0049
P1 cortex
CCAGCCCCTC (
5
)
13.6
0.0136
P1 cortex
TAAAGTAATA (
3
)
4.5
0.0045
Hypothalamus
CCAGCCCCTC (
5
)
5.4
0.0054
Hypothalamus
CAACTGAGGA (
4
)
1.8
0.0018
Hypothalamus
GGAGGCAGCA
(
5
)
1.8
0.0018
Hypothalamus
TAAAGTAATA (
3
)
1.8
0.0018
E12.5 retina
CCAGCCCCTC (
5
)
9.4
0.0094
E12.5 retina
AGATCTGTGG (
2
)
7.5
0.0075
E12.5 retina
TAAAGTAATA (
3
)
3.8
0.0038
E14.5 retina
TAAAGTAATA (
3
)
3.6
0.0036
E14.5 retina
CAACTGAGGA (
4
)
1.8
0.0018
E14.5 retina
CCAGCCCCTC (
5
)
1.8
0.0018
E14.5 retina
GGAGGCAGCA
(
5
)
1.8
0.0018
E16.5 retina
CCAGCCCCTC (
5
)
12.7
0.0127
E16.5 retina
TAAAGTAATA (
3
)
3.6
0.0036
E16.5 retina
AGATCTGTGG (
2
)
1.8
0.0018
E18.5 retina
CCAGCCCCTC (
5
)
12.7
0.0127
E18.5 retina
TAAAGTAATA (
3
)
5.5
0.0055
E18.5 retina
AGATCTGTGG (
2
)
3.6
0.0036
P0.5 retina
AGATCTGTGG (
2
)
9.8
0.0098
P0.5 retina
CCAGCCCCTC (
5
)
3.9
0.0039
P0.5 retina
TAAAGTAATA (
3
)
2
0.002
P2.5 retina
CCAGCCCCTC (
5
)
5.3
0.0053
P2.5 retina
AGATCTGTGG (
2
)
3.5
0.0035
P2.5 retina
TAAAGTAATA (
3
)
1.8
0.0018
P4.5 retina
TAAAGTAATA (
3
)
15.9
0.0159
P4.5 retina
CCAGCCCCTC (
5
)
9.9
0.0099
P6.5 retina
CCAGCCCCTC (
5
)
15
0.015
P6.5 retina
TAAAGTAATA (
3
)
6.7
0.0067
P6.5 retina
CAACTGAGGA (
4
)
1.7
0.0017
P10.5 crx- retina
CCAGCCCCTC (
5
)
9.3
0.0093
P10.5 crx- retina
TAAAGTAATA (
3
)
3.7
0.0037
P10.5 crx- retina
AGATCTGTGG (
2
)
1.9
0.0019
P10.5 crx+ retina
CCAGCCCCTC (
5
)
5.8
0.0058
P10.5 crx+ retina
AGATCTGTGG (
2
)
1.9
0.0019
Adult retinal
CCAGCCCCTC (
5
)
13
0.013
Adult retinal
CAACTGAGGA (
4
)
1.9
0.0019
ONL
CCAGCCCCTC (
5
)
3.8
0.0038
ONL
TAAAGTAATA (
3
)
1.9
0.0019
