Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334685	D8Wsu49e	DNA segment, Chr 8, Wayne State University 49, expressed	8	8 39.0 cM	71927
Gene Ontology	cell adhesion | cell-matrix adhesion | extracellular space | integral to membrane | integrin complex
Human Homolog	CDA08[T-cell immunomodulatory protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGAGAAGA (8) 63.6 0.0636 P8 Cb GC TTAATATACC 6.5 0.0065 P8 Cb GC CTGTGGCTGT 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AGAGACACCA (6) 1.6 0.0016 P8 Cb GC TACTTGGTGT 1.6 0.0016 Cb medulloblastoma GAGGAGAAGA (8) 50.9 0.0509 Cb medulloblastoma CTGTGGCTGT 16.2 0.0162 Cb medulloblastoma TTAATATACC 9.2 0.0092 Cb medulloblastoma AGAGACACCA (6) 4.6 0.0046 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture GAGGAGAAGA (8) 57.1 0.0571 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TTAATATACC 8 0.008 P8 GC+1d culture AGAGACACCA (6) 4.6 0.0046 P8 GC+1d culture TGTCACCCTA 2.3 0.0023 P8 GC+1d culture TGTCCATCTC 1.1 0.0011 P8 GC+SHH+1d culture GAGGAGAAGA (8) 76.1 0.0761 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTGTGGCTGT 3.5 0.0035 P8 GC+SHH+1d culture TTAATATACC 3.5 0.0035 P8 GC+SHH+1d culture TACTTGGTGT 1.2 0.0012 3T3 fibroblasts GAGGAGAAGA (8) 7 0.007 E15 cortex AGAGACACCA (6) 14.8 0.0148 E15 cortex GAGGAGAAGA (8) 14.8 0.0148 E15 cortex CTGTGGCTGT 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AGAGACACCA (6) 9.1 0.0091 P1 cortex GAGGAGAAGA (8) 9.1 0.0091 P1 cortex CTGTGGCTGT 4.5 0.0045 P1 cortex TTAATATACC 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GAGGAGAAGA (8) 83.3 0.0833 Hypothalamus TTAATATACC 10.9 0.0109 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus ATGACTGTCT (5) 3.6 0.0036 Hypothalamus CTGTGGCTGT 3.6 0.0036 Hypothalamus TACTTGGTGT 1.8 0.0018 E12.5 retina GAGGAGAAGA (8) 242.2 0.2422 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TACTTGGTGT 1.9 0.0019 E14.5 retina GAGGAGAAGA (8) 91.1 0.0911 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CTGTGGCTGT 5.5 0.0055 E14.5 retina ATGACTGTCT (5) 1.8 0.0018 E14.5 retina TACTTGGTGT 1.8 0.0018 E14.5 retina TGTCCATCTC 1.8 0.0018 E14.5 retina TTAATATACC 1.8 0.0018 E16.5 retina GAGGAGAAGA (8) 77.9 0.0779 E16.5 retina TACTTGGTGT 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CTGTGGCTGT 3.6 0.0036 E16.5 retina ATGACTGTCT (5) 1.8 0.0018 E16.5 retina TACACAACAG (2) 1.8 0.0018 E16.5 retina TTAATATACC 1.8 0.0018 E18.5 retina GAGGAGAAGA (8) 72.8 0.0728 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina CTGTGGCTGT 7.3 0.0073 E18.5 retina TTAATATACC 5.5 0.0055 E18.5 retina TACTTGGTGT 1.8 0.0018 P0.5 retina GAGGAGAAGA (8) 74.6 0.0746 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina AGAGACACCA (6) 2 0.002 P0.5 retina CTGTGGCTGT 2 0.002 P0.5 retina TACTTGGTGT 2 0.002 P0.5 retina TGTCACCCTA 2 0.002 P2.5 retina GAGGAGAAGA (8) 72.2 0.0722 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TACTTGGTGT 5.3 0.0053 P2.5 retina TGTCCATCTC 1.8 0.0018 P2.5 retina TTAATATACC 1.8 0.0018 P4.5 retina GAGGAGAAGA (8) 91.1 0.0911 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTGTGGCTGT 4 0.004 P4.5 retina TTAATATACC 4 0.004 P4.5 retina TACTTGGTGT 2 0.002 P6.5 retina GAGGAGAAGA (8) 45 0.045 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGAGACACCA (6) 3.3 0.0033 P6.5 retina CTGTGGCTGT 3.3 0.0033 P6.5 retina TACTTGGTGT 1.7 0.0017 P10.5 crx- retina GAGGAGAAGA (8) 31.6 0.0316 P10.5 crx- retina TACTTGGTGT 5.6 0.0056 P10.5 crx- retina TACACAACAG (2) 3.7 0.0037 P10.5 crx+ retina GAGGAGAAGA (8) 51.9 0.0519 P10.5 crx+ retina TACTTGGTGT 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal GAGGAGAAGA (8) 40.7 0.0407 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CTGTGGCTGT 1.9 0.0019 Adult retinal TACTTGGTGT 1.9 0.0019 ONL GAGGAGAAGA (8) 34.5 0.0345 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TTAATATACC 1.9 0.0019