Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334999	Ckap4	cytoskeleton-associated protein 4	10		216197
Gene Ontology	biological_process unknown | cell surface | endoplasmic reticulum | protein binding
Human Homolog	CKAP4[cytoskeleton-associated protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGATCTA (3) TACCCTTGCC TGCGTTTGGA 8.1 0.0081 Cb medulloblastoma TACCCTTGCC 2.3 0.0023 P8 GC+1d culture AAAAGATCTA (3) GAGAACAATT TACCCTTGCC 14.8 0.0148 P8 GC+SHH+1d culture GAGAACAATT GTGACCCCTC TACCCTTGCC TGCGTTTGGA 15.2 0.0152 3T3 fibroblasts AAAAGATCTA (3) TACCCTTGCC 35 0.035 P1 cortex TACCCTTGCC 13.6 0.0136 Hypothalamus TACCCTTGCC 1.8 0.0018 E12.5 retina AAAAGATCTA (3) GAGGCCTGGA (2) GTGACCCCTC TACCCTTGCC TTTTTTGAAT 28.3 0.0283 E14.5 retina AAAAGATCTA (3) GTGACCCCTC TACCCTTGCC 21.9 0.0219 E16.5 retina GAAAGTAGCA GAGAACAATT TACCCTTGCC 14.5 0.0145 E18.5 retina GAAAGTAGCA TACCCTTGCC 9.1 0.0091 P0.5 retina TACCCTTGCC TTTTTTGAAT 11.8 0.0118 P2.5 retina GAAAGTAGCA GTGACCCCTC TACCCTTGCC 10.6 0.0106 P4.5 retina TACCCTTGCC 5.9 0.0059 P6.5 retina GTGACCCCTC TACCCTTGCC 10 0.01 P10.5 crx- retina AAAAGATCTA (3) GAGGCCTGGA (2) GTGACCCCTC TACCCTTGCC 20.5 0.0205 P10.5 crx+ retina GAGAACAATT GAGGCCTGGA (2) TACCCTTGCC TGCGTTTGGA 15.3 0.0153 ONL GTGACCCCTC 1.9 0.0019