Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.335310
2900018E21Rik
RIKEN cDNA 2900018E21 gene
10
72943
Mm.335310
C230047L17Rik
RIKEN cDNA C230047L17 gene
10
319343
Mm.335310
E530015N03Rik
RIKEN cDNA E530015N03 gene
10
380650
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGGCGATG
(
5
)
6.5
0.0065
P8 Cb GC
TAGCGCGCCC
(
35
)
1.6
0.0016
Cb medulloblastoma
CAGGGCGATG
(
5
)
6.9
0.0069
Cb medulloblastoma
TTTAACAAAA
(
5
)
4.6
0.0046
Cb medulloblastoma
GCAAGAAAAA
(
11
)
2.3
0.0023
Cb medulloblastoma
TTCTTTAAAA
(
7
)
2.3
0.0023
P8 GC+1d culture
CAGGGCGATG
(
5
)
20.5
0.0205
P8 GC+1d culture
TGACTACAAA
(
4
)
2.3
0.0023
P8 GC+1d culture
TAGCGCGCCC
(
35
)
1.1
0.0011
P8 GC+1d culture
TTCTTTAAAA
(
7
)
1.1
0.0011
P8 GC+1d culture
TTTAACAAAA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGGGCGATG
(
5
)
10.5
0.0105
P8 GC+SHH+1d culture
GCAAGAAAAA
(
11
)
1.2
0.0012
3T3 fibroblasts
CAGGGCGATG
(
5
)
24.5
0.0245
3T3 fibroblasts
TAGCGCGCCC
(
35
)
3.5
0.0035
P1 cortex
TTTAACAAAA
(
5
)
4.5
0.0045
Hypothalamus
TGACTACAAA
(
4
)
1.8
0.0018
Hypothalamus
TTTAACAAAA
(
5
)
1.8
0.0018
E12.5 retina
AACTTGAAAA (
7
)
1.9
0.0019
E14.5 retina
AACTTGAAAA (
7
)
1.8
0.0018
E18.5 retina
TTCTTTAAAA
(
7
)
3.6
0.0036
E18.5 retina
AACTTGAAAA (
7
)
1.8
0.0018
P2.5 retina
TTCTTTAAAA
(
7
)
1.8
0.0018
P4.5 retina
TTCTTTAAAA
(
7
)
4
0.004
P6.5 retina
TGACTACAAA
(
4
)
1.7
0.0017
P10.5 crx- retina
CAGGGCGATG
(
5
)
5.6
0.0056
P10.5 crx- retina
TGACTACAAA
(
4
)
3.7
0.0037
P10.5 crx+ retina
CAGGGCGATG
(
5
)
7.7
0.0077
P10.5 crx+ retina
TGACTACAAA
(
4
)
5.8
0.0058
Adult retinal
AACTTGAAAA (
7
)
1.9
0.0019
Adult retinal
GCAAGAAAAA
(
11
)
1.9
0.0019
ONL
TTCTTTAAAA
(
7
)
1.9
0.0019
