Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335315	Eef1a1	eukaryotic translation elongation factor 1 alpha 1	9		13627
Gene Ontology	cytoplasm | GTP binding | protein biosynthesis | translation elongation factor activity | translational elongation
Human Homolog	EEF1A1[eukaryotic translation elongation factor 1 alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 320 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGCAGACAG 141.9 0.1419 P8 Cb GC CAAGTTTGCT 48.9 0.0489 P8 Cb GC TGTGTTGAGA 14.7 0.0147 P8 Cb GC CTGGAGCCAA 9.8 0.0098 P8 Cb GC GTGGTTACCT 8.2 0.0082 P8 Cb GC CTCTTCTGGC 6.5 0.0065 P8 Cb GC AAGCTTTGAG 4.9 0.0049 P8 Cb GC TCACGAACAG 4.9 0.0049 P8 Cb GC GGGCAGACAG (2) 3.3 0.0033 P8 Cb GC TAGAAGTCTG 3.3 0.0033 P8 Cb GC AAGGCAGACA (2) 1.6 0.0016 P8 Cb GC AGGCAGACCG 1.6 0.0016 P8 Cb GC AGGCGGACAG 1.6 0.0016 P8 Cb GC AGGGCAGACA 1.6 0.0016 P8 Cb GC CAAGTTTGCC 1.6 0.0016 P8 Cb GC GGCTTGCCAG 1.6 0.0016 P8 Cb GC GGGTTGCCAG (2) 1.6 0.0016 P8 Cb GC GTACAACTTG 1.6 0.0016 P8 Cb GC TCCCCTACAT 1.6 0.0016 P8 Cb GC TTTTTGATGA 1.6 0.0016 Cb medulloblastoma AGGCAGACAG 41.6 0.0416 Cb medulloblastoma CAAGTTTGCT 16.2 0.0162 Cb medulloblastoma AAGGCAGACA (2) 4.6 0.0046 Cb medulloblastoma TCCCCTACAT 4.6 0.0046 Cb medulloblastoma AGGCAGCCAG (2) 2.3 0.0023 Cb medulloblastoma CTCTTCTGGC 2.3 0.0023 Cb medulloblastoma GGAATAAACT (2) 2.3 0.0023 Cb medulloblastoma GGGCAGACAG (2) 2.3 0.0023 Cb medulloblastoma TGGTTTCTTT 2.3 0.0023 Cb medulloblastoma TGTGTTGAGA 2.3 0.0023 P8 GC+1d culture AGGCAGACAG 287.7 0.2877 P8 GC+1d culture TTTTTGATGA 12.6 0.0126 P8 GC+1d culture CAAGTTTGCT 6.8 0.0068 P8 GC+1d culture GGCTTGCCAG 4.6 0.0046 P8 GC+1d culture TCACGAACAG 3.4 0.0034 P8 GC+1d culture AAGCTTTGAG 2.3 0.0023 P8 GC+1d culture AAGGCAGACA (2) 2.3 0.0023 P8 GC+1d culture AGGCAGGCAG (2) 2.3 0.0023 P8 GC+1d culture CACGTAGGCA 2.3 0.0023 P8 GC+1d culture CTGGGAAGCA (2) 2.3 0.0023 P8 GC+1d culture GGGCAGACAG (2) 2.3 0.0023 P8 GC+1d culture TCCCCTACAT 2.3 0.0023 P8 GC+1d culture TGTGTTGAGA 2.3 0.0023 P8 GC+1d culture ACTCTTCTGG (2) 1.1 0.0011 P8 GC+1d culture AGGCATACAG 1.1 0.0011 P8 GC+1d culture CTATGTGGGC (2) 1.1 0.0011 P8 GC+1d culture CTGGAACCCA 1.1 0.0011 P8 GC+1d culture CTGGAGGCCA (2) 1.1 0.0011 P8 GC+1d culture GAAGCTTTTA 1.1 0.0011 P8 GC+1d culture GGAAGCAAGG 1.1 0.0011 P8 GC+1d culture GGGTTGCCAG (2) 1.1 0.0011 P8 GC+1d culture TGGCAGACAG 1.1 0.0011 P8 GC+1d culture TGGTTTCTTT 1.1 0.0011 P8 GC+SHH+1d culture AGGCAGACAG 265.8 0.2658 P8 GC+SHH+1d culture TTTTTGATGA 10.5 0.0105 P8 GC+SHH+1d culture CAAGTTTGCT 7 0.007 P8 GC+SHH+1d culture TGTGTTGAGA 7 0.007 P8 GC+SHH+1d culture CTATGTGGGC (2) 3.5 0.0035 P8 GC+SHH+1d culture GGCTTGCCAG 3.5 0.0035 P8 GC+SHH+1d culture TCCCCTACAT 3.5 0.0035 P8 GC+SHH+1d culture AAGGCAGACA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGGCAGGCAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGCAGACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGTTGCCAG (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTTTGAG 1.2 0.0012 P8 GC+SHH+1d culture ACTCTTCTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture AGGCAAACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture AGGCAGACGG 1.2 0.0012 P8 GC+SHH+1d culture ATTACAGACA (4) 1.2 0.0012 P8 GC+SHH+1d culture CACGTAGGCA 1.2 0.0012 P8 GC+SHH+1d culture CTGGAGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGCAAGG 1.2 0.0012 P8 GC+SHH+1d culture TCACGAACAG 1.2 0.0012 P8 GC+SHH+1d culture TCATTGGGTT 1.2 0.0012 P8 GC+SHH+1d culture TGGCAGACAG 1.2 0.0012 3T3 fibroblasts AGGCAGACAG 757.1 0.7571 3T3 fibroblasts TCCCCTACAT 17.5 0.0175 3T3 fibroblasts CACGTAGGCA 14 0.014 3T3 fibroblasts TTTTTGATGA 14 0.014 3T3 fibroblasts CTATGTGGGC (2) 7 0.007 3T3 fibroblasts CTGGAGGCCA (2) 7 0.007 3T3 fibroblasts GGGCAGACAG (2) 7 0.007 3T3 fibroblasts AAGGCAGACA (2) 3.5 0.0035 3T3 fibroblasts AGGCAGCCAG (2) 3.5 0.0035 3T3 fibroblasts CAAGTTTGCT 3.5 0.0035 3T3 fibroblasts CTGGAGCCAA 3.5 0.0035 3T3 fibroblasts CTGGGAAGCA (2) 3.5 0.0035 3T3 fibroblasts GAAGCTTTTA 3.5 0.0035 3T3 fibroblasts GGCTTGCCAG 3.5 0.0035 3T3 fibroblasts GTACAAGCAG 3.5 0.0035 3T3 fibroblasts TCACGAACAG 3.5 0.0035 3T3 fibroblasts TGGCAGACAG 3.5 0.0035 E15 cortex AGGCAGACAG 549.2 0.5492 E15 cortex GGGCAGACAG (2) 29.7 0.0297 E15 cortex TGGCAGACAG 24.7 0.0247 E15 cortex GGGTTGCCAG (2) 9.9 0.0099 E15 cortex TTTTTGATGA 9.9 0.0099 E15 cortex AAGCTTTGAG 4.9 0.0049 E15 cortex ACTCTTCTGG (2) 4.9 0.0049 E15 cortex GGCAGACAGT (2) 4.9 0.0049 E15 cortex TCCCCTACAT 4.9 0.0049 E15 cortex TGTGTTGAGA 4.9 0.0049 P1 cortex AGGCAGACAG 231.8 0.2318 P1 cortex TCCCCTACAT 68.2 0.0682 P1 cortex TTTTTGATGA 40.9 0.0409 P1 cortex GGCAGACAGT (2) 13.6 0.0136 P1 cortex AGGCAGACGG 9.1 0.0091 P1 cortex AAGCAGACAG (2) 4.5 0.0045 P1 cortex AGGCAAACAG (2) 4.5 0.0045 P1 cortex AGGCACACAG 4.5 0.0045 P1 cortex AGGCAGCCAG (2) 4.5 0.0045 P1 cortex AGGCGGACAG 4.5 0.0045 P1 cortex CTGGAGGCCA (2) 4.5 0.0045 P1 cortex TGGTTTCTTT 4.5 0.0045 Hypothalamus AGGCAGACAG 101.4 0.1014 Hypothalamus AAGCTTTGAG 3.6 0.0036 Hypothalamus CAAGTTTGCT 3.6 0.0036 Hypothalamus GGCTTGCCAG 3.6 0.0036 Hypothalamus AGGCAAACAG (2) 1.8 0.0018 Hypothalamus AGGCAGACTG (2) 1.8 0.0018 Hypothalamus AGGCAGCCAG (2) 1.8 0.0018 Hypothalamus CTATGTGGGC (2) 1.8 0.0018 Hypothalamus CTGGAGCCAA 1.8 0.0018 Hypothalamus GGCAGACAGT (2) 1.8 0.0018 Hypothalamus GTGGTTACCT 1.8 0.0018 Hypothalamus TGTGTTGAGA 1.8 0.0018 Hypothalamus TTTTTGATGA 1.8 0.0018 E12.5 retina AGGCAGACAG 251.6 0.2516 E12.5 retina TTTTTGATGA 41.3 0.0413 E12.5 retina TCCCCTACAT 7.5 0.0075 E12.5 retina CAAGTTTGCT 5.6 0.0056 E12.5 retina TGTGTTGAGA 5.6 0.0056 E12.5 retina AAGCAGACAG (2) 1.9 0.0019 E12.5 retina AAGGCAGACA (2) 1.9 0.0019 E12.5 retina AGGCAGCCAG (2) 1.9 0.0019 E12.5 retina CACGTAGGCA 1.9 0.0019 E12.5 retina CTGGAACCCA 1.9 0.0019 E12.5 retina CTGGAGCCAG (2) 1.9 0.0019 E12.5 retina GGCTTGCCAG 1.9 0.0019 E12.5 retina GGGCAGACAG (2) 1.9 0.0019 E12.5 retina TGGTTTCTTT 1.9 0.0019 E12.5 retina TTTTTATTTG (2) 1.9 0.0019 E14.5 retina AGGCAGACAG 158.5 0.1585 E14.5 retina CAAGTTTGCT 12.8 0.0128 E14.5 retina CTATGTGGGC (2) 9.1 0.0091 E14.5 retina TTTTTGATGA 9.1 0.0091 E14.5 retina GGCTTGCCAG 7.3 0.0073 E14.5 retina AGGCAAACAG (2) 5.5 0.0055 E14.5 retina AGGCAGACTG (2) 5.5 0.0055 E14.5 retina TGTGTTGAGA 5.5 0.0055 E14.5 retina AAGCTTTGAG 3.6 0.0036 E14.5 retina TGGCCCCAGC (3) 3.6 0.0036 E14.5 retina AGGCAGCCAG (2) 1.8 0.0018 E14.5 retina CTGGAGCCAA 1.8 0.0018 E14.5 retina GGGTTGCCAG (2) 1.8 0.0018 E14.5 retina GTGGTTACCT 1.8 0.0018 E14.5 retina TGGCAGACAG 1.8 0.0018 E14.5 retina TGGGGCAGGT 1.8 0.0018 E16.5 retina AGGCAGACAG 193.8 0.1938 E16.5 retina CAAGTTTGCT 41.7 0.0417 E16.5 retina GGCTTGCCAG 21.7 0.0217 E16.5 retina AAGCTTTGAG 19.9 0.0199 E16.5 retina CTGGAGCCAA 16.3 0.0163 E16.5 retina CTATGTGGGC (2) 14.5 0.0145 E16.5 retina TGTGTTGAGA 14.5 0.0145 E16.5 retina AGGCAAACAG (2) 7.2 0.0072 E16.5 retina CTCTTCTGGC 7.2 0.0072 E16.5 retina AGGCAGACTG (2) 5.4 0.0054 E16.5 retina TTTTTGATGA 5.4 0.0054 E16.5 retina AGGCAGCCAG (2) 3.6 0.0036 E16.5 retina AAGGCAGACA (2) 1.8 0.0018 E16.5 retina AGGCAGGCAG (2) 1.8 0.0018 E16.5 retina AGGCGGACAG 1.8 0.0018 E16.5 retina TCACGAACAG 1.8 0.0018 E16.5 retina TCCCCTACAT 1.8 0.0018 E16.5 retina TGGCAGACAG 1.8 0.0018 E16.5 retina TTTTTATTTG (2) 1.8 0.0018 E18.5 retina AGGCAGACAG 114.6 0.1146 E18.5 retina TTTTTGATGA 10.9 0.0109 E18.5 retina GGCAGACAGT (2) 9.1 0.0091 E18.5 retina CTATGTGGGC (2) 7.3 0.0073 E18.5 retina GGCTTGCCAG 7.3 0.0073 E18.5 retina AGGCAAACAG (2) 3.6 0.0036 E18.5 retina CAAGTTTGCT 3.6 0.0036 E18.5 retina CTCTTCTGGC 3.6 0.0036 E18.5 retina GGGCAGACAG (2) 3.6 0.0036 E18.5 retina GGGTTGCCAG (2) 3.6 0.0036 E18.5 retina TGGCAGACAG 3.6 0.0036 E18.5 retina AAGCAGACAG (2) 1.8 0.0018 E18.5 retina AAGGCAGACA (2) 1.8 0.0018 E18.5 retina AGGCACACAG 1.8 0.0018 E18.5 retina AGGCGGACAG 1.8 0.0018 E18.5 retina GGGGGGGCAC 1.8 0.0018 E18.5 retina TCACGAACAG 1.8 0.0018 E18.5 retina TGGGGCAGGT 1.8 0.0018 E18.5 retina TGTGTTGAGA 1.8 0.0018 P0.5 retina AGGCAGACAG 441.6 0.4416 P0.5 retina TCCCCTACAT 27.5 0.0275 P0.5 retina TTTTTGATGA 13.7 0.0137 P0.5 retina AGGCAAACAG (2) 9.8 0.0098 P0.5 retina CAAGTTTGCT 7.9 0.0079 P0.5 retina ACTCTTCTGG (2) 5.9 0.0059 P0.5 retina CTGGAGCCAA 5.9 0.0059 P0.5 retina GGGCAGACAG (2) 5.9 0.0059 P0.5 retina AAGCAGACAG (2) 3.9 0.0039 P0.5 retina AGGCACACAG 3.9 0.0039 P0.5 retina AGGCAGACTG (2) 3.9 0.0039 P0.5 retina TGGCAGACAG 3.9 0.0039 P0.5 retina AAGGCAGACA (2) 2 0.002 P0.5 retina AGGCATACAG 2 0.002 P0.5 retina AGGGCAGACA 2 0.002 P0.5 retina ATTACAGACA (4) 2 0.002 P0.5 retina CTATGTGGGC (2) 2 0.002 P0.5 retina CTGGAACCCA 2 0.002 P0.5 retina CTGGAGCCAG (2) 2 0.002 P0.5 retina CTGGGAAGCA (2) 2 0.002 P0.5 retina GTACAAGCAG 2 0.002 P0.5 retina GTGGTTACCT 2 0.002 P0.5 retina TGGTTTCTTT 2 0.002 P2.5 retina AGGCAGACAG 105.6 0.1056 P2.5 retina TTTTTGATGA 12.3 0.0123 P2.5 retina AGGCAGCCAG (2) 7 0.007 P2.5 retina GGCTTGCCAG 5.3 0.0053 P2.5 retina TCCCCTACAT 5.3 0.0053 P2.5 retina GGGTTGCCAG (2) 3.5 0.0035 P2.5 retina AGGCAGGCAG (2) 1.8 0.0018 P2.5 retina CAAGTTTGCT 1.8 0.0018 P2.5 retina CACGTAGGCA 1.8 0.0018 P2.5 retina CTATGTGGGC (2) 1.8 0.0018 P2.5 retina GAAGCTTTTA 1.8 0.0018 P2.5 retina GTACAACTTG 1.8 0.0018 P2.5 retina GTACAAGCAG 1.8 0.0018 P2.5 retina TAGAAGTCTG 1.8 0.0018 P2.5 retina TCACGAACAG 1.8 0.0018 P2.5 retina TGGCAGACAG 1.8 0.0018 P4.5 retina AGGCAGACAG 83.2 0.0832 P4.5 retina TCCCCTACAT 5.9 0.0059 P4.5 retina TTTTTGATGA 5.9 0.0059 P4.5 retina AAGGCAGACA (2) 4 0.004 P4.5 retina CTCTTCTGGC 4 0.004 P4.5 retina TCACGAACAG 4 0.004 P4.5 retina AGGCAAACAG (2) 2 0.002 P4.5 retina AGGCATACAG 2 0.002 P4.5 retina AGGCGGACAG 2 0.002 P4.5 retina AGGGCAGACA 2 0.002 P4.5 retina ATTACAGACA (4) 2 0.002 P4.5 retina GGGCAGACAG (2) 2 0.002 P4.5 retina TGTGTTGAGA 2 0.002 P6.5 retina AGGCAGACAG 105 0.105 P6.5 retina TCCCCTACAT 18.3 0.0183 P6.5 retina TTTTTGATGA 6.7 0.0067 P6.5 retina AAGGCAGACA (2) 5 0.005 P6.5 retina AGGCAGACCG 3.3 0.0033 P6.5 retina CAAGTTTGCT 3.3 0.0033 P6.5 retina CATCGTAAAC (2) 3.3 0.0033 P6.5 retina AGGCACACAG 1.7 0.0017 P6.5 retina AGGCAGACTG (2) 1.7 0.0017 P6.5 retina AGGCAGCCAG (2) 1.7 0.0017 P6.5 retina ATTACAGACA (4) 1.7 0.0017 P6.5 retina CTGGAGCCAA 1.7 0.0017 P6.5 retina CTGGAGGCCA (2) 1.7 0.0017 P6.5 retina GGCAGACAGT (2) 1.7 0.0017 P6.5 retina GGGGGGGCAC 1.7 0.0017 P6.5 retina GGGTTGCCAG (2) 1.7 0.0017 P6.5 retina TCACGAACAG 1.7 0.0017 P6.5 retina TTTTTATTTG (2) 1.7 0.0017 P10.5 crx- retina AGGCAGACAG 228.5 0.2285 P10.5 crx- retina TGTGTTGAGA 9.3 0.0093 P10.5 crx- retina CAAGTTTGCT 7.4 0.0074 P10.5 crx- retina GGCTTGCCAG 7.4 0.0074 P10.5 crx- retina AAGCTTTGAG 5.6 0.0056 P10.5 crx- retina TCCCCTACAT 5.6 0.0056 P10.5 crx- retina AGGCAAACAG (2) 3.7 0.0037 P10.5 crx- retina ATTACAGACA (4) 3.7 0.0037 P10.5 crx- retina CTGGAGGCCA (2) 3.7 0.0037 P10.5 crx- retina GGGCAGACAG (2) 3.7 0.0037 P10.5 crx- retina AAGCAGACAG (2) 1.9 0.0019 P10.5 crx- retina AAGGCAGACA (2) 1.9 0.0019 P10.5 crx- retina AGGCGGACAG 1.9 0.0019 P10.5 crx- retina CATCGTAAAC (2) 1.9 0.0019 P10.5 crx- retina CTGGAACCCA 1.9 0.0019 P10.5 crx- retina CTGGGAAGCA (2) 1.9 0.0019 P10.5 crx- retina GTACAACTTG 1.9 0.0019 P10.5 crx- retina TGGCAGACAG 1.9 0.0019 P10.5 crx- retina TGGCCCCAGC (3) 1.9 0.0019 P10.5 crx- retina TTTTTGATGA 1.9 0.0019 P10.5 crx+ retina AGGCAGACAG 105.7 0.1057 P10.5 crx+ retina TCCCCTACAT 5.8 0.0058 P10.5 crx+ retina AAGGCAGACA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTGATGA 3.8 0.0038 P10.5 crx+ retina AGGCAGACGG 1.9 0.0019 P10.5 crx+ retina GTACAACTTG 1.9 0.0019 P10.5 crx+ retina TCACGAACAG 1.9 0.0019 P10.5 crx+ retina TGTGTTGAGA 1.9 0.0019 Adult retinal AGGCAGACAG 125.9 0.1259 Adult retinal TCCCCTACAT 53.7 0.0537 Adult retinal TCACGAACAG 3.7 0.0037 Adult retinal AAGCTTTGAG 1.9 0.0019 Adult retinal ACTCTTCTGG (2) 1.9 0.0019 Adult retinal AGGCACACAG 1.9 0.0019 Adult retinal AGGCAGCCAG (2) 1.9 0.0019 Adult retinal AGGGCAGACA 1.9 0.0019 Adult retinal CACGTAGGCA 1.9 0.0019 Adult retinal CTGGAGGCCA (2) 1.9 0.0019 Adult retinal GGAAGCAAGG 1.9 0.0019 Adult retinal GGGCAGACAG (2) 1.9 0.0019 Adult retinal GGGGGGGCAC 1.9 0.0019 Adult retinal GGGTTGCCAG (2) 1.9 0.0019 Adult retinal GTGGTTACCT 1.9 0.0019 ONL AGGCAGACAG 53.6 0.0536 ONL TCCCCTACAT 13.4 0.0134 ONL AGGCAGCCAG (2) 3.8 0.0038 ONL CAAGTTTGCC 3.8 0.0038 ONL GGAATAAACT (2) 3.8 0.0038 ONL TTTTTGATGA 3.8 0.0038 ONL AAGCTTTGAG 1.9 0.0019 ONL ACTCTTCTGG (2) 1.9 0.0019 ONL AGGCAAACAG (2) 1.9 0.0019 ONL TGGGGCAGGT 1.9 0.0019 ONL TGGTTTCTTT 1.9 0.0019