Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335395	Rab6b	RAB6B, member RAS oncogene family	9	9 56.0 cM	270192
Gene Ontology	Golgi apparatus | GTP binding | GTPase activity | intracellular protein transport | protein transport | protein transporter activity | retrograde transport, Golgi to ER | small GTPase mediated signal transduction
Human Homolog	RAB6B[RAB6B, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGTCAAAC 19.6 0.0196 P8 Cb GC TGACCCAAAA 6.5 0.0065 P8 Cb GC GGGAGGGAGG (4) 4.9 0.0049 P8 Cb GC GCCTCCTCCT (6) 3.3 0.0033 P8 Cb GC CTGAGTCTTT 1.6 0.0016 P8 Cb GC TGTATACAAC (2) 1.6 0.0016 Cb medulloblastoma TTGGTCAAAC 37 0.037 Cb medulloblastoma CTGAGTCTTT 2.3 0.0023 Cb medulloblastoma TGCTCAGTGT 2.3 0.0023 P8 GC+1d culture TTGGTCAAAC 32 0.032 P8 GC+1d culture GCCTCCTCCT (6) 5.7 0.0057 P8 GC+1d culture GGGAGGGAGG (4) 3.4 0.0034 P8 GC+1d culture TACTTGGAAG (3) 1.1 0.0011 P8 GC+1d culture TGACCCAAAA 1.1 0.0011 P8 GC+SHH+1d culture TTGGTCAAAC 31.6 0.0316 P8 GC+SHH+1d culture CCCTGTGACC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGACCCAAAA 2.3 0.0023 P8 GC+SHH+1d culture TGTATACAAC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAGATGCAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCTCCTCCT (6) 1.2 0.0012 P8 GC+SHH+1d culture GGGAGGGAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TACTTGGAAG (3) 1.2 0.0012 3T3 fibroblasts TGACCCAAAA 10.5 0.0105 3T3 fibroblasts GCCTCCTCCT (6) 7 0.007 E15 cortex GGGAGGGAGG (4) 14.8 0.0148 E15 cortex TTGGTCAAAC 9.9 0.0099 P1 cortex TTGGTCAAAC 22.7 0.0227 P1 cortex TGACCCAAAA 4.5 0.0045 P1 cortex TGCTCAGTGT 4.5 0.0045 Hypothalamus TTGGTCAAAC 67 0.067 Hypothalamus GCCTCCTCCT (6) 14.5 0.0145 Hypothalamus GGGAGGGAGG (4) 5.4 0.0054 Hypothalamus TGTATACAAC (2) 5.4 0.0054 Hypothalamus GCTAGTACCT 3.6 0.0036 Hypothalamus GGGAGGGGAG (4) 3.6 0.0036 Hypothalamus GCAGATGCAT (2) 1.8 0.0018 Hypothalamus GCCCTCCTCC (11) 1.8 0.0018 Hypothalamus TGACCCAAAA 1.8 0.0018 E12.5 retina TTGGTCAAAC 7.5 0.0075 E12.5 retina TGACCCAAAA 3.8 0.0038 E12.5 retina GCAGATGCAT (2) 1.9 0.0019 E12.5 retina GGGAAGGGGA (5) 1.9 0.0019 E12.5 retina GGGAGGGAGG (4) 1.9 0.0019 E12.5 retina GGGAGGGGAG (4) 1.9 0.0019 E12.5 retina TGCTCAGTGT 1.9 0.0019 E14.5 retina GCCTCCTCCT (6) 54.7 0.0547 E14.5 retina TTGGTCAAAC 14.6 0.0146 E14.5 retina GGGAGGGGAG (4) 9.1 0.0091 E14.5 retina GGGAGGGAGG (4) 3.6 0.0036 E16.5 retina GCCTCCTCCT (6) 34.4 0.0344 E16.5 retina TTGGTCAAAC 21.7 0.0217 E16.5 retina TGCTCAGTGT 7.2 0.0072 E16.5 retina CCCTGTGACC (3) 1.8 0.0018 E16.5 retina CTGAGTCTTT 1.8 0.0018 E16.5 retina GCCCTCCTCC (11) 1.8 0.0018 E16.5 retina TGTATACAAC (2) 1.8 0.0018 E18.5 retina TTGGTCAAAC 32.7 0.0327 E18.5 retina GCCTCCTCCT (6) 21.8 0.0218 E18.5 retina GGGAGGGGAG (4) 3.6 0.0036 E18.5 retina TGACCCAAAA 3.6 0.0036 P0.5 retina TTGGTCAAAC 9.8 0.0098 P0.5 retina TGACCCAAAA 3.9 0.0039 P0.5 retina CCCTGTGACC (3) 2 0.002 P0.5 retina GCCTCCTCCT (6) 2 0.002 P0.5 retina GCTAGTACCT 2 0.002 P2.5 retina TTGGTCAAAC 22.9 0.0229 P2.5 retina GCCTCCTCCT (6) 7 0.007 P2.5 retina GGGAAGGGGA (5) 3.5 0.0035 P2.5 retina GGGAGGGAGG (4) 3.5 0.0035 P2.5 retina CTGAGTCTTT 1.8 0.0018 P2.5 retina GGGAGGGGAG (4) 1.8 0.0018 P2.5 retina TGACCCAAAA 1.8 0.0018 P4.5 retina TTGGTCAAAC 37.6 0.0376 P4.5 retina GCCTCCTCCT (6) 4 0.004 P4.5 retina GGGAAGGGGA (5) 2 0.002 P4.5 retina GGGAGGGAGG (4) 2 0.002 P4.5 retina GGGAGGGGAG (4) 2 0.002 P4.5 retina TGCTCAGTGT 2 0.002 P4.5 retina TGTATACAAC (2) 2 0.002 P6.5 retina TTGGTCAAAC 20 0.02 P6.5 retina GCCTCCTCCT (6) 5 0.005 P6.5 retina CTGAGTCTTT 3.3 0.0033 P6.5 retina GGGAGGGGAG (4) 3.3 0.0033 P6.5 retina TGCTCAGTGT 3.3 0.0033 P6.5 retina TGTATACAAC (2) 1.7 0.0017 P10.5 crx- retina TTGGTCAAAC 18.6 0.0186 P10.5 crx- retina GCCTCCTCCT (6) 9.3 0.0093 P10.5 crx- retina TGCTCAGTGT 3.7 0.0037 P10.5 crx- retina CTGAGTCTTT 1.9 0.0019 P10.5 crx- retina TGACCCAAAA 1.9 0.0019 P10.5 crx+ retina TTGGTCAAAC 21.1 0.0211 P10.5 crx+ retina GCCTCCTCCT (6) 5.8 0.0058 P10.5 crx+ retina GGGAGGGAGG (4) 3.8 0.0038 P10.5 crx+ retina TACTTGGAAG (3) 1.9 0.0019 Adult retinal TTGGTCAAAC 11.1 0.0111 Adult retinal CCCTGTGACC (3) 1.9 0.0019 Adult retinal GCCCTCCTCC (11) 1.9 0.0019 Adult retinal GCCTCCTCCT (6) 1.9 0.0019 Adult retinal GGGAGGGGAG (4) 1.9 0.0019 ONL TTGGTCAAAC 5.7 0.0057 ONL CCCTGTGACC (3) 1.9 0.0019 ONL GGGAGGGAGG (4) 1.9 0.0019 ONL GGGAGGGGAG (4) 1.9 0.0019 ONL TACTTGGAAG (3) 1.9 0.0019