Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335942	Set	SET translocation	2	2 B	56086
Gene Ontology	cell growth and/or maintenance | DNA binding | DNA replication | nucleosome assembly | nucleus | protein phosphatase inhibitor activity
Human Homolog	SET[SET translocation (myeloid leukemia-associated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 169 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTGAGAC CTCTGTGGGA GATGATGAAG (2) GTGGTGTGGA GTTCTCAATT TATCTGTCTA TCGGGAACCA (2) TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 89.8 0.0898 Cb medulloblastoma GTTTTCAATT (2) TATCTGTCTA TCTGCGCCGA TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 23 0.023 P8 GC+1d culture ATGTTGAGAC CTCTGTGGGA GTTCTCAATT TATCTGTCTA TCGGGAACCA (2) TCTTAACGTC TTGGTAAATG TTTAATTGTG TTTTTTTTTT (2) 43.2 0.0432 P8 GC+SHH+1d culture ATGTTGAGAC GATGATGAAG (2) GTGGTGTGGA GTTCTCAATT TATCTGTCTA TCTGCGCCGA TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 65.6 0.0656 3T3 fibroblasts TATCTGTCTA TTTAATTGTG 7 0.007 E15 cortex CTCTGTGGGA GTTCTCAATT TCTGCGCCGA TCTTAACGTC TTTTTTTTTT (2) 39.4 0.0394 P1 cortex ATGTTGAGAC TATCTGTCTA TCTTAACGTC TTTAATTGTG TTTTTTTTTT (2) 49.9 0.0499 Hypothalamus AAGATTTAAA ATGTTGAGAC GATGATGAAG (2) GTTCTCAATT TATCTGTCTA TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTTTTTTTT (2) 37.9 0.0379 E12.5 retina ATGTTGAGAC GATGATGAAA (2) GATGATGAAG (2) GTGGTGTGGA GTTCTCAATT TATCTGTCTA TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 135.3 0.1353 E14.5 retina AAGATTTAAA ATGTTGAGAC CTCTGTGGGA GATGATGAAG (2) GCTTCTCCTT (2) GTGGTGTGGA GTTCTCAATT TATCTGTCTA TCGGGAACCA (2) TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 100.2 0.1002 E16.5 retina ATGTTGAGAC GATGATGAAG (2) GCTTCTCCTT (2) GTGGTGTGGA GTTCTCAATT TATCTGTCTA TCGGGAACCA (2) TCTTAACGTC TTGTCAGATG TTTTTTTTTT (2) 68.7 0.0687 E18.5 retina AAGATTTAAA ATGTTGAGAC CTCTGTGGGA GATGATGAAA (2) GATGATGAAG (2) GTTCTCAATT TATCTGTCTA TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 79.9 0.0799 P0.5 retina ATGTTGAGAC CTCTGTGGGA GATGATGAAG (2) GCTTCTCCTT (2) GTGGTGTGGA TATCTGTCTA TCGGGAACCA (2) TCTTAACGTC TTGGTAAATG TTTAATTGTG TTTTTTTTTT (2) 55.1 0.0551 P2.5 retina ATGTTGAGAC CTCTGTGGGA TATCTGTCTA TCTGCGCCGA TCTTAACGTC TTGGTAAATG TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 47.6 0.0476 P4.5 retina AAGATTTAAA ATGTTGAGAC GATGATGAAG (2) GTTCTCAATT TATCTGTCTA TCTGCGCCGA TCTTAACGTC TTGGTAAATG TTTAATTGTG TTTTTTTTTT (2) 61.4 0.0614 P6.5 retina ATGTTGAGAC GATGATGAAG (2) TATCTGTCTA TTGTCAGATG TTTAATTGTG TTTTTTTTTT (2) 30.1 0.0301 P10.5 crx- retina AAGATTTAAA ATGTTGAGAC GATGATGAAG (2) GTTCTCAATT TATCTGTCTA TCTTAACGTC TTGGTAAATG 31.7 0.0317 P10.5 crx+ retina ATGTTGAGAC CTCTGTGGGA GTTCTCAATT TATCTGTCTA TTGTCAGATG TTTTTTTTTT (2) 19.1 0.0191 Adult retinal AAGATTTAAA ATGTTGAGAC TATCTGTCTA TCTTAACGTC TTTAATTGTG TTTTTTTTTT (2) 26 0.026 ONL AAGATTTAAA ATGTTGAGAC GATGATGAAG (2) GTTTTCAATT (2) TATCTGTCTA TTTAATTGTG TTTTTTTTTT (2) 24.8 0.0248