Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.336898
Nab2
Ngfi-A binding protein 2
10
10 70.0 cM
17937
Mm.336898
1700012D01Rik
RIKEN cDNA 1700012D01 gene
10
72243
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCACTGCCCT (
11
)
1.6
0.0016
P8 Cb GC
GCCCCCTTCC (
12
)
1.6
0.0016
P8 Cb GC
GGACAGGACT (
6
)
1.6
0.0016
P8 Cb GC
TCTTGGGCTA (
3
)
1.6
0.0016
Cb medulloblastoma
GATCCTAAGC
(
3
)
2.3
0.0023
Cb medulloblastoma
GCCACAAACC (
3
)
2.3
0.0023
Cb medulloblastoma
GCCCCCTTCC (
12
)
2.3
0.0023
P8 GC+1d culture
GATCCTAAGC
(
3
)
3.4
0.0034
P8 GC+1d culture
GCCCCCTTCC (
12
)
2.3
0.0023
P8 GC+1d culture
GGACAGGACT (
6
)
2.3
0.0023
P8 GC+1d culture
GCACTGCCCT (
11
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCCCCTTCC (
12
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGGGGCTCT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GATCCTAAGC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GCACTGCCCT (
11
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTTGGGCTA (
3
)
1.2
0.0012
3T3 fibroblasts
GCCCCCTTCC (
12
)
35
0.035
3T3 fibroblasts
GCACTGCCCT (
11
)
14
0.014
E15 cortex
GCCACAAACC (
3
)
4.9
0.0049
P1 cortex
TCTTGGGCTA (
3
)
4.5
0.0045
Hypothalamus
TCTTGGGCTA (
3
)
3.6
0.0036
E12.5 retina
CTGGGGCTCT (
6
)
1.9
0.0019
E12.5 retina
GCCCCCTTCC (
12
)
1.9
0.0019
E12.5 retina
TCTTGGGCTA (
3
)
1.9
0.0019
E14.5 retina
ATGTACAGCA (
2
)
3.6
0.0036
E14.5 retina
CTGGGGCTCT (
6
)
1.8
0.0018
E14.5 retina
GCCACAAACC (
3
)
1.8
0.0018
E16.5 retina
GCCACAAACC (
3
)
1.8
0.0018
E16.5 retina
TCTTGGGCTA (
3
)
1.8
0.0018
E18.5 retina
ATGTACAGCA (
2
)
1.8
0.0018
P0.5 retina
TCTTGGGCTA (
3
)
2
0.002
P2.5 retina
GGACAGGACT (
6
)
1.8
0.0018
P4.5 retina
GCCCCCTTCC (
12
)
2
0.002
P6.5 retina
GGACAGGACT (
6
)
5
0.005
P6.5 retina
TCTTGGGCTA (
3
)
5
0.005
P6.5 retina
ATGTACAGCA (
2
)
1.7
0.0017
P10.5 crx- retina
GCCCCCTTCC (
12
)
3.7
0.0037
P10.5 crx- retina
GGACAGGACT (
6
)
3.7
0.0037
P10.5 crx- retina
ATGTACAGCA (
2
)
1.9
0.0019
P10.5 crx- retina
TCTTGGGCTA (
3
)
1.9
0.0019
P10.5 crx+ retina
TCTTGGGCTA (
3
)
5.8
0.0058
P10.5 crx+ retina
GATCCTAAGC
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCCCCCTTCC (
12
)
1.9
0.0019
Adult retinal
GGACAGGACT (
6
)
13
0.013
Adult retinal
TCTTGGGCTA (
3
)
7.4
0.0074
Adult retinal
GCCCCCTTCC (
12
)
3.7
0.0037
ONL
GGACAGGACT (
6
)
3.8
0.0038
ONL
TCTTGGGCTA (
3
)
1.9
0.0019
