Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33716
6530403G13Rik
RIKEN cDNA 6530403G13 gene
10
76227
Mm.33716
BC013529
cDNA sequence BC013529
10
215751
Human Homolog
C6orf72[chromosome 6 open reading frame 72]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTTGTATCT (
7
)
6.5
0.0065
P8 Cb GC
GTCTCACTGT
(
5
)
4.9
0.0049
P8 Cb GC
TATGTGATAT
(
7
)
1.6
0.0016
P8 Cb GC
TGTCAGTCCC
(
3
)
1.6
0.0016
Cb medulloblastoma
ATTTGTATCT (
7
)
2.3
0.0023
Cb medulloblastoma
TGTCAGTCCC
(
3
)
2.3
0.0023
P8 GC+1d culture
ATTTGTATCT (
7
)
12.6
0.0126
P8 GC+1d culture
GTCTCACTGT
(
5
)
4.6
0.0046
P8 GC+1d culture
CTTTATTCCA (
4
)
1.1
0.0011
P8 GC+1d culture
TATGTGATAT
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
ATTTGTATCT (
7
)
8.2
0.0082
P8 GC+SHH+1d culture
GTCTCACTGT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CTTTATTCCA (
4
)
1.2
0.0012
3T3 fibroblasts
CTTTATTCCA (
4
)
42.1
0.0421
3T3 fibroblasts
GTCTCACTGT
(
5
)
3.5
0.0035
3T3 fibroblasts
TGTCAGTCCC
(
3
)
3.5
0.0035
P1 cortex
ATTTGTATCT (
7
)
9.1
0.0091
Hypothalamus
GTCTCACTGT
(
5
)
7.2
0.0072
Hypothalamus
ATTTGTATCT (
7
)
1.8
0.0018
E12.5 retina
GTCTCACTGT
(
5
)
5.6
0.0056
E12.5 retina
ATTTGTATCT (
7
)
3.8
0.0038
E14.5 retina
ATTTGTATCT (
7
)
7.3
0.0073
E14.5 retina
GTCTCACTGT
(
5
)
3.6
0.0036
E14.5 retina
TATGTGATAT
(
7
)
3.6
0.0036
E14.5 retina
TGTCAGTCCC
(
3
)
3.6
0.0036
E14.5 retina
GGGAAATGTG
(
2
)
1.8
0.0018
E16.5 retina
ATTTGTATCT (
7
)
12.7
0.0127
E16.5 retina
GTCTCACTGT
(
5
)
10.9
0.0109
E18.5 retina
ATTTGTATCT (
7
)
12.7
0.0127
E18.5 retina
GTCTCACTGT
(
5
)
5.5
0.0055
P0.5 retina
ATTTGTATCT (
7
)
9.8
0.0098
P0.5 retina
GTCTCACTGT
(
5
)
3.9
0.0039
P0.5 retina
TGTCAGTCCC
(
3
)
3.9
0.0039
P2.5 retina
ATTTGTATCT (
7
)
12.3
0.0123
P2.5 retina
GTCTCACTGT
(
5
)
5.3
0.0053
P2.5 retina
CTTTATTCCA (
4
)
1.8
0.0018
P2.5 retina
GGGAAATGTG
(
2
)
1.8
0.0018
P2.5 retina
TGTCAGTCCC
(
3
)
1.8
0.0018
P4.5 retina
GTCTCACTGT
(
5
)
13.9
0.0139
P4.5 retina
ATTTGTATCT (
7
)
9.9
0.0099
P6.5 retina
GTCTCACTGT
(
5
)
10
0.01
P6.5 retina
ATTTGTATCT (
7
)
1.7
0.0017
P10.5 crx- retina
ATTTGTATCT (
7
)
7.4
0.0074
P10.5 crx- retina
GTCTCACTGT
(
5
)
3.7
0.0037
P10.5 crx+ retina
ATTTGTATCT (
7
)
9.6
0.0096
P10.5 crx+ retina
GGGAAATGTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTCAGTCCC
(
3
)
1.9
0.0019
Adult retinal
ATTTGTATCT (
7
)
7.4
0.0074
Adult retinal
GTCTCACTGT
(
5
)
3.7
0.0037
Adult retinal
TGTCAGTCCC
(
3
)
1.9
0.0019
ONL
ATTTGTATCT (
7
)
1.9
0.0019
ONL
GTCTCACTGT
(
5
)
1.9
0.0019
ONL
TATGTGATAT
(
7
)
1.9
0.0019
