Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3374	Efnb1	ephrin B1	X	X 37.0 cM	13641
Gene Ontology	axon guidance | development | ephrin receptor binding | extracellular space | integral to membrane | lipid raft | membrane | neurogenesis | protein binding
Human Homolog	EFNB1[ephrin-B1] | EFNB1[ephrin-B1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTGGGTGGAG (3) 4.9 0.0049 P8 Cb GC GAAGGAGCTG (2) 3.3 0.0033 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GAAGGAGCTG (2) 3.4 0.0034 P8 GC+1d culture AGGGTCCAAA 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture AGACAATGCT 1.2 0.0012 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex AGACAATGCT 9.9 0.0099 E15 cortex GAAGGAGCTG (2) 9.9 0.0099 E15 cortex GAAGGAGTTG (3) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex AGGGTCCAAA 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus AAAACAAAGC (6) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GAAGGAGCTG (2) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina AGGGTCCAAA 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GGGGGTGGAG (6) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina AAAACAAAGC (6) 1.8 0.0018 E18.5 retina GAAGGAGCTG (2) 1.8 0.0018 E18.5 retina TTGGGTGGAG (3) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GAAGGAGCTG (2) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina AGACAATGCT 3.5 0.0035 P2.5 retina GAAGGAGTTG (3) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina AGGGTCCAAA 3.3 0.0033 P6.5 retina GAAGGAGCTG (2) 3.3 0.0033 P6.5 retina AAAACAAAGC (6) 1.7 0.0017 P6.5 retina AGACAATGCT 1.7 0.0017 P6.5 retina TTGGGTGGAG (3) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GAAGGAGCTG (2) 7.4 0.0074 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GGGGGTGGAG (6) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GGGGGTGGAG (6) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GAAGGAGTTG (3) 3.8 0.0038