Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.337825	6530402N02Rik	RIKEN cDNA 6530402N02 gene	3		226548
Gene Ontology	endoplasmic reticulum | Golgi apparatus | integral to membrane | metanephros development | peptidase activity | positive regulation of enzyme activity | protein binding | protein processing
Human Homolog	APH-1A[likely ortholog of C. elegans anterior pharynx defective 1A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGCTCTGG (7) 9.8 0.0098 P8 Cb GC GCATCGCAGG (2) 8.2 0.0082 Cb medulloblastoma GCATCGCAGG (2) 11.6 0.0116 Cb medulloblastoma GGGGCTCTGG (7) 11.6 0.0116 Cb medulloblastoma GCCCTGGAGA (3) 2.3 0.0023 Cb medulloblastoma GGGCTCTGGC (2) 2.3 0.0023 P8 GC+1d culture GCATCGCAGG (2) 16 0.016 P8 GC+1d culture GGGGCTCTGG (7) 6.8 0.0068 P8 GC+1d culture CACTTCCTTC (9) 1.1 0.0011 P8 GC+1d culture GGGCTCTGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GCATCGCAGG (2) 11.7 0.0117 P8 GC+SHH+1d culture GGGGCTCTGG (7) 11.7 0.0117 3T3 fibroblasts GGGGCTCTGG (7) 35 0.035 3T3 fibroblasts GCATCGCAGG (2) 10.5 0.0105 3T3 fibroblasts GCCCTGGAGA (3) 3.5 0.0035 E15 cortex GGGGCTCTGG (7) 29.7 0.0297 E15 cortex GCATCGCAGG (2) 9.9 0.0099 P1 cortex GGGGCTCTGG (7) 9.1 0.0091 P1 cortex GGGCTCTGGC (2) 4.5 0.0045 Hypothalamus GGGGCTCTGG (7) 10.9 0.0109 Hypothalamus GCATCGCAGG (2) 3.6 0.0036 Hypothalamus GAGTGGGCAG (5) 1.8 0.0018 Hypothalamus GCCCTGGAGA (3) 1.8 0.0018 Hypothalamus GGGCTCTGGG (8) 1.8 0.0018 E12.5 retina GCATCGCAGG (2) 13.1 0.0131 E12.5 retina GGGGCTCTGG (7) 5.6 0.0056 E12.5 retina GACTCCACCC (5) 1.9 0.0019 E12.5 retina GGGCTCTGGG (8) 1.9 0.0019 E12.5 retina GTAGTGGGAG (2) 1.9 0.0019 E14.5 retina GCATCGCAGG (2) 3.6 0.0036 E14.5 retina GAGTGGGCAG (5) 1.8 0.0018 E14.5 retina GGGGCTCTGG (7) 1.8 0.0018 E14.5 retina GTAGTGGGAG (2) 1.8 0.0018 E16.5 retina GCATCGCAGG (2) 3.6 0.0036 E16.5 retina GGGCTCTGGG (8) 1.8 0.0018 E18.5 retina GGGGCTCTGG (7) 10.9 0.0109 E18.5 retina GCATCGCAGG (2) 3.6 0.0036 E18.5 retina GAGTGGGCAG (5) 1.8 0.0018 E18.5 retina GGGGGCTCTG (7) 1.8 0.0018 P0.5 retina GCATCGCAGG (2) 7.9 0.0079 P0.5 retina GGGGCTCTGG (7) 7.9 0.0079 P0.5 retina GACTCCACCC (5) 5.9 0.0059 P0.5 retina GTAGTGGGAG (2) 2 0.002 P2.5 retina GCATCGCAGG (2) 8.8 0.0088 P2.5 retina GGGGCTCTGG (7) 7 0.007 P2.5 retina GGGGGCTCTG (7) 1.8 0.0018 P4.5 retina GGGGCTCTGG (7) 9.9 0.0099 P4.5 retina GCATCGCAGG (2) 7.9 0.0079 P4.5 retina GGGGGCTCTG (7) 2 0.002 P6.5 retina GGGGCTCTGG (7) 6.7 0.0067 P6.5 retina GCATCGCAGG (2) 5 0.005 P10.5 crx- retina GCATCGCAGG (2) 16.7 0.0167 P10.5 crx- retina GGGGCTCTGG (7) 9.3 0.0093 P10.5 crx- retina GGGGGCTCTG (7) 1.9 0.0019 P10.5 crx+ retina GGGGCTCTGG (7) 17.3 0.0173 P10.5 crx+ retina GCATCGCAGG (2) 5.8 0.0058 P10.5 crx+ retina GTAGTGGGAG (2) 1.9 0.0019 Adult retinal GGGGCTCTGG (7) 14.8 0.0148 Adult retinal GCATCGCAGG (2) 5.6 0.0056 Adult retinal GTAGTGGGAG (2) 1.9 0.0019 ONL GGGGCTCTGG (7) 19.2 0.0192 ONL GCATCGCAGG (2) 3.8 0.0038 ONL CACTTCCTTC (9) 1.9 0.0019 ONL GGGCTCTGGC (2) 1.9 0.0019 ONL GGGCTCTGGG (8) 1.9 0.0019