Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.339566
2610507I01Rik
RIKEN cDNA 2610507I01 gene
11
72203
Mm.339566
5033414D05Rik
RIKEN cDNA 5033414D05 gene
11
75993
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCTGCAT (
29
)
8.2
0.0082
Cb medulloblastoma
GCCTCTGCAT (
29
)
6.9
0.0069
P8 GC+1d culture
GCCTCTGCAT (
29
)
20.5
0.0205
P8 GC+1d culture
CAGAGAGAGG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCTCTGCAT (
29
)
9.4
0.0094
P8 GC+SHH+1d culture
CAGAGAGAGG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGCTCCTA (
5
)
2.3
0.0023
3T3 fibroblasts
GCCTCTGCAT (
29
)
7
0.007
3T3 fibroblasts
GCTGCTCCTA (
5
)
3.5
0.0035
E15 cortex
GCCTCTGCAT (
29
)
39.6
0.0396
P1 cortex
GCCTCTGCAT (
29
)
18.2
0.0182
Hypothalamus
GCCTCTGCAT (
29
)
10.9
0.0109
Hypothalamus
CAGAGAGAGG (
6
)
1.8
0.0018
Hypothalamus
GCTGCTCCTA (
5
)
1.8
0.0018
E12.5 retina
GCCTCTGCAT (
29
)
11.3
0.0113
E12.5 retina
GCCTTTGCAT
(
3
)
1.9
0.0019
E14.5 retina
GCCTCTGCAT (
29
)
14.6
0.0146
E16.5 retina
GCCTCTGCAT (
29
)
16.3
0.0163
E16.5 retina
GCTGCTCCTA (
5
)
1.8
0.0018
E18.5 retina
GCCTCTGCAT (
29
)
9.1
0.0091
P0.5 retina
GCCTCTGCAT (
29
)
23.6
0.0236
P0.5 retina
GCCTTTGCAT
(
3
)
2
0.002
P2.5 retina
GCCTCTGCAT (
29
)
31.7
0.0317
P2.5 retina
GCTGCTCCTA (
5
)
3.5
0.0035
P2.5 retina
CAGAGAGAGG (
6
)
1.8
0.0018
P2.5 retina
GCCTTTGCAT
(
3
)
1.8
0.0018
P4.5 retina
GCCTCTGCAT (
29
)
19.8
0.0198
P6.5 retina
GCCTCTGCAT (
29
)
21.7
0.0217
P10.5 crx- retina
GCCTCTGCAT (
29
)
27.9
0.0279
P10.5 crx+ retina
GCCTCTGCAT (
29
)
32.7
0.0327
P10.5 crx+ retina
CAGAGAGAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
GCCTTTGCAT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGCTCCTA (
5
)
1.9
0.0019
Adult retinal
GCCTCTGCAT (
29
)
33.3
0.0333
ONL
GCCTCTGCAT (
29
)
17.2
0.0172
