Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3399	Traf2	Tnf receptor-associated factor 2	2		22030
Gene Ontology	apoptosis | protein catabolism | protein ubiquitination | receptor activity | regulation of JNK cascade | signal transduction | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRAF2[TNF receptor-associated factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCTGCAGG GCTGCAGCCA TTGTGCTTGC (2) 8.1 0.0081 Cb medulloblastoma CGCCTGCAGG 4.6 0.0046 P8 GC+1d culture CGCCTGCAGG GCTGCAGCCA TATCCTTAAA TCAAAGTGCC 5.6 0.0056 P8 GC+SHH+1d culture CGCCTGCAGG GCTGCAGCCA TATCCTTAAA TCAAAGTGCC 9.4 0.0094 3T3 fibroblasts CGCCTGCAGG TCAAAGTGCC 10.5 0.0105 P1 cortex TATCCTTAAA 4.5 0.0045 Hypothalamus CGCCTGCAGG TATCCTTAAA 3.6 0.0036 E12.5 retina CGCCTGCAGG TCAAAGTGCC 5.7 0.0057 E14.5 retina TTGTGCTTGC (2) 1.8 0.0018 E16.5 retina TCAAAGTGCC TTGTGCTTGC (2) 5.4 0.0054 E18.5 retina AGGCTGCAGC (2) 3.6 0.0036 P0.5 retina CGCCTGCAGG GCTGCAGCCA 5.9 0.0059 P4.5 retina GCTGCAGCCA 2 0.002 P6.5 retina AGGCTGCAGC (2) CGCCTGCAGG TTGTGCTTGC (2) 5.1 0.0051 P10.5 crx- retina CGCCTGCAGG 7.4 0.0074 P10.5 crx+ retina GCTGCAGCCA TCAAAGTGCC 3.8 0.0038 Adult retinal TCAAAGTGCC 1.9 0.0019