Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34059
5830410F13Rik
RIKEN cDNA 5830410F13 gene
2
74745
Mm.34059
2310047O13Rik
RIKEN cDNA 2310047O13 gene
2
66960
Human Homolog
C10orf97[chromosome 10 open reading frame 97]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCCCCAAAC (
7
)
19.6
0.0196
P8 Cb GC
AGAATCTCTA
(
3
)
3.3
0.0033
P8 Cb GC
ACTGGCTACA
(
2
)
1.6
0.0016
P8 Cb GC
CTACAGACAG
(
4
)
1.6
0.0016
P8 Cb GC
TTTACCAAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
GGCCCCAAAC (
7
)
16.2
0.0162
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
AGAATCTCTA
(
3
)
4.6
0.0046
Cb medulloblastoma
GTAGTGGTAG
(
2
)
2.3
0.0023
P8 GC+1d culture
GGCCCCAAAC (
7
)
12.6
0.0126
P8 GC+1d culture
TTTACCAAAA
(
4
)
5.7
0.0057
P8 GC+1d culture
AGAATCTCTA
(
3
)
2.3
0.0023
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
ACTGGCTACA
(
2
)
1.1
0.0011
P8 GC+1d culture
GTAGTGGTAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCCCCAAAC (
7
)
15.2
0.0152
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
ACTGGCTACA
(
2
)
1.2
0.0012
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
P1 cortex
AGAATCTCTA
(
3
)
9.1
0.0091
Hypothalamus
AGAATCTCTA
(
3
)
5.4
0.0054
Hypothalamus
TTTACCAAAA
(
4
)
3.6
0.0036
Hypothalamus
CTACAGACAG
(
4
)
1.8
0.0018
Hypothalamus
GGCCCCAAAC (
7
)
1.8
0.0018
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
GGCCCCAAAC (
7
)
5.6
0.0056
E12.5 retina
TTTACCAAAA
(
4
)
3.8
0.0038
E12.5 retina
AGAATCTCTA
(
3
)
1.9
0.0019
E14.5 retina
GGCCCCAAAC (
7
)
10.9
0.0109
E14.5 retina
AGAATCTCTA
(
3
)
3.6
0.0036
E14.5 retina
GTAGTGGTAG
(
2
)
1.8
0.0018
E14.5 retina
TTTACCAAAA
(
4
)
1.8
0.0018
E16.5 retina
GGCCCCAAAC (
7
)
16.3
0.0163
E16.5 retina
AGAATCTCTA
(
3
)
5.4
0.0054
E16.5 retina
CTACAGACAG
(
4
)
1.8
0.0018
E16.5 retina
TTTACCAAAA
(
4
)
1.8
0.0018
E18.5 retina
TTTACCAAAA
(
4
)
5.5
0.0055
E18.5 retina
GGCCCCAAAC (
7
)
3.6
0.0036
E18.5 retina
GTAGTGGTAG
(
2
)
1.8
0.0018
P0.5 retina
GGCCCCAAAC (
7
)
11.8
0.0118
P0.5 retina
TTTACCAAAA
(
4
)
3.9
0.0039
P0.5 retina
AGAATCTCTA
(
3
)
2
0.002
P2.5 retina
GGCCCCAAAC (
7
)
10.6
0.0106
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
TTTACCAAAA
(
4
)
7
0.007
P2.5 retina
AGAATCTCTA
(
3
)
1.8
0.0018
P4.5 retina
TTTACCAAAA
(
4
)
11.9
0.0119
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
AGAATCTCTA
(
3
)
7.9
0.0079
P4.5 retina
GGCCCCAAAC (
7
)
4
0.004
P6.5 retina
TTTACCAAAA
(
4
)
8.3
0.0083
P6.5 retina
AGAATCTCTA
(
3
)
5
0.005
P6.5 retina
GGCCCCAAAC (
7
)
5
0.005
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P10.5 crx- retina
GGCCCCAAAC (
7
)
27.9
0.0279
P10.5 crx- retina
ACTGGCTACA
(
2
)
1.9
0.0019
P10.5 crx- retina
AGAATCTCTA
(
3
)
1.9
0.0019
P10.5 crx- retina
TTTACCAAAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGCCCCAAAC (
7
)
9.6
0.0096
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
TTTACCAAAA
(
4
)
5.8
0.0058
P10.5 crx+ retina
AGAATCTCTA
(
3
)
1.9
0.0019
Adult retinal
GGCCCCAAAC (
7
)
3.7
0.0037
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
TTTACCAAAA
(
4
)
3.7
0.0037
ONL
GGCCCCAAAC (
7
)
3.8
0.0038
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
