Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3406	Tcfe2a	transcription factor E2a	10	10 43.0 cM	21423
Gene Ontology	DNA binding | nucleus | protein binding | protein binding | protein homodimerization activity | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TCF3[transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGTTTCTG 19.6 0.0196 P8 Cb GC AGACTTTTAT (2) 8.2 0.0082 P8 Cb GC GTCTACAAGG 8.2 0.0082 P8 Cb GC TTGCTTTGTT (10) 1.6 0.0016 Cb medulloblastoma TGCTGATGCC (2) 2.3 0.0023 P8 GC+1d culture TCTGTTTCTG 8 0.008 P8 GC+1d culture CTGCTTTGTT (4) 3.4 0.0034 P8 GC+1d culture AGACTTTTAT (2) 1.1 0.0011 P8 GC+1d culture CCAGCCTCCC (4) 1.1 0.0011 P8 GC+1d culture CTCCCTTTTC 1.1 0.0011 P8 GC+1d culture GCAGGCTGCC (3) 1.1 0.0011 P8 GC+1d culture GTCTACAAGG 1.1 0.0011 P8 GC+SHH+1d culture TCTGTTTCTG 4.7 0.0047 P8 GC+SHH+1d culture CTGCTTTGTT (4) 2.3 0.0023 P8 GC+SHH+1d culture GCAGGCTGCC (3) 2.3 0.0023 P8 GC+SHH+1d culture GTCTACAAGG 2.3 0.0023 P8 GC+SHH+1d culture CTCCCTTTTC 1.2 0.0012 3T3 fibroblasts CTGCTTTGTT (4) 3.5 0.0035 E15 cortex TCTGTTTCTG 4.9 0.0049 E15 cortex TTGCTTTGTT (10) 4.9 0.0049 P1 cortex GCCTGCAGAG (5) 4.5 0.0045 Hypothalamus CCAGCCTCCC (4) 1.8 0.0018 Hypothalamus CTGCTTTGTT (4) 1.8 0.0018 Hypothalamus GTCTACAAGG 1.8 0.0018 Hypothalamus TCTGTTTCTG 1.8 0.0018 E12.5 retina GTCTACAAGG 16.9 0.0169 E12.5 retina TCTGTTTCTG 11.3 0.0113 E12.5 retina AGACTTTTAT (2) 1.9 0.0019 E12.5 retina CTCCCTTTTC 1.9 0.0019 E14.5 retina GTCTACAAGG 10.9 0.0109 E14.5 retina TCTGTTTCTG 10.9 0.0109 E14.5 retina CTCCCTTTTC 3.6 0.0036 E14.5 retina AGACTTTTAT (2) 1.8 0.0018 E16.5 retina TCTGTTTCTG 7.2 0.0072 E16.5 retina GTCTACAAGG 5.4 0.0054 E16.5 retina CTGCTTTGTT (4) 1.8 0.0018 E16.5 retina GCCTGCAGAG (5) 1.8 0.0018 E16.5 retina TGCTGATGCC (2) 1.8 0.0018 E16.5 retina TTGCTTTGTT (10) 1.8 0.0018 E18.5 retina TCTGTTTCTG 9.1 0.0091 E18.5 retina GTCTACAAGG 7.3 0.0073 E18.5 retina AGACTTTTAT (2) 1.8 0.0018 E18.5 retina CTCCCTTTTC 1.8 0.0018 E18.5 retina CTGCTTTGTT (4) 1.8 0.0018 P0.5 retina TCTGTTTCTG 9.8 0.0098 P0.5 retina AGACTTTTAT (2) 2 0.002 P0.5 retina GCCTGCAGAG (5) 2 0.002 P0.5 retina GTCTACAAGG 2 0.002 P0.5 retina TTGCTTTGTT (10) 2 0.002 P2.5 retina TCTGTTTCTG 12.3 0.0123 P2.5 retina AGACTTTTAT (2) 5.3 0.0053 P2.5 retina GTCTACAAGG 5.3 0.0053 P2.5 retina CTCCCTTTTC 3.5 0.0035 P2.5 retina CCAGCCTCCC (4) 1.8 0.0018 P2.5 retina GCCTGCAGAG (5) 1.8 0.0018 P4.5 retina GTCTACAAGG 9.9 0.0099 P4.5 retina AGACTTTTAT (2) 4 0.004 P4.5 retina TCTGTTTCTG 2 0.002 P6.5 retina TCTGTTTCTG 8.3 0.0083 P6.5 retina GTCTACAAGG 3.3 0.0033 P6.5 retina TTGCTTTGTT (10) 1.7 0.0017 P10.5 crx- retina CTCCCTTTTC 1.9 0.0019 P10.5 crx- retina TCTGTTTCTG 1.9 0.0019 P10.5 crx- retina TTGCTTTGTT (10) 1.9 0.0019 P10.5 crx+ retina AGACTTTTAT (2) 3.8 0.0038 P10.5 crx+ retina CCAGCCTCCC (4) 3.8 0.0038 P10.5 crx+ retina TCTGTTTCTG 3.8 0.0038 P10.5 crx+ retina GTCTACAAGG 1.9 0.0019 Adult retinal GCCTGCAGAG (5) 3.7 0.0037 ONL TGCTGATGCC (2) 1.9 0.0019