Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341719	Rplp2	ribosomal protein, large P2	12	7 F5	67186
Gene Ontology	intracellular | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP2[ribosomal protein, large P2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTTGTCT (7) 577.5 0.5775 P8 Cb GC GGATTTGGCT (3) 323 0.323 P8 Cb GC GGATTTGGCC (6) 19.6 0.0196 P8 Cb GC TCGTCATCCG 6.5 0.0065 P8 Cb GC GGATTGGCTT 1.6 0.0016 Cb medulloblastoma TGGGTTGTCT (7) 235.9 0.2359 Cb medulloblastoma GGATTTGGCT (3) 115.6 0.1156 Cb medulloblastoma GGGTTTGGCT (5) 2.3 0.0023 P8 GC+1d culture TGGGTTGTCT (7) 537.7 0.5377 P8 GC+1d culture GGATTTGGCT (3) 208.9 0.2089 P8 GC+1d culture GGATTTGGCC (6) 5.7 0.0057 P8 GC+1d culture CGCTACGTCG 2.3 0.0023 P8 GC+1d culture TCGTCATCCG 2.3 0.0023 P8 GC+1d culture GGGTTTGGCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGGTTGTCT (7) 530.4 0.5304 P8 GC+SHH+1d culture GGATTTGGCT (3) 258.8 0.2588 P8 GC+SHH+1d culture TCGTCATCCG 7 0.007 P8 GC+SHH+1d culture GGATTTGGCC (6) 3.5 0.0035 P8 GC+SHH+1d culture GGGTTTGGCT (5) 3.5 0.0035 3T3 fibroblasts TGGGTTGTCT (7) 147.2 0.1472 3T3 fibroblasts GGATTTGGCT (3) 87.6 0.0876 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGATTTGGCC (6) 3.5 0.0035 3T3 fibroblasts GGGATTTGGC (2) 3.5 0.0035 E15 cortex TGGGTTGTCT (7) 272.1 0.2721 E15 cortex GGATTTGGCT (3) 118.7 0.1187 E15 cortex CGCTACGTCG 24.7 0.0247 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TGGGTTGTCT (7) 290.9 0.2909 P1 cortex GGATTTGGCT (3) 77.3 0.0773 P1 cortex TCGTCATCCG 4.5 0.0045 Hypothalamus TGGGTTGTCT (7) 382.2 0.3822 Hypothalamus GGATTTGGCT (3) 146.7 0.1467 Hypothalamus TCGTCATCCG 9.1 0.0091 Hypothalamus CGCTACGTCG 1.8 0.0018 Hypothalamus GGATTGGGCT 1.8 0.0018 E12.5 retina TGGGTTGTCT (7) 963.1 0.9631 E12.5 retina GGATTTGGCT (3) 446.8 0.4468 E12.5 retina TCGTCATCCG 9.4 0.0094 E12.5 retina TCGGCTGCGG 5.6 0.0056 E12.5 retina GGATTTGGCC (6) 3.8 0.0038 E12.5 retina GGGTTTGGCT (5) 3.8 0.0038 E12.5 retina GGATTTTGGC (8) 1.9 0.0019 E12.5 retina GGGATTTGGC (2) 1.9 0.0019 E14.5 retina TGGGTTGTCT (7) 1189.8 1.1898 E14.5 retina GGATTTGGCT (3) 400.8 0.4008 E14.5 retina TCGTCATCCG 32.8 0.0328 E14.5 retina GGATTTGGCC (6) 16.4 0.0164 E14.5 retina GGATTGGCTT 3.6 0.0036 E14.5 retina GGATTGGGCT 3.6 0.0036 E14.5 retina GGGTTTGGCT (5) 3.6 0.0036 E14.5 retina CGCTACGTCG 1.8 0.0018 E14.5 retina GGGATTTGGC (2) 1.8 0.0018 E14.5 retina TCGGCTGCGG 1.8 0.0018 E16.5 retina TGGGTTGTCT (7) 1233.4 1.2334 E16.5 retina GGATTTGGCT (3) 460 0.46 E16.5 retina TCGTCATCCG 41.7 0.0417 E16.5 retina GGATTGGGCT 3.6 0.0036 E16.5 retina AGACCAGAAC (6) 1.8 0.0018 E16.5 retina CGCTACGTCG 1.8 0.0018 E16.5 retina GGATCTGGCT (7) 1.8 0.0018 E16.5 retina GGATTGGCTT 1.8 0.0018 E16.5 retina GGATTTGGCC (6) 1.8 0.0018 E16.5 retina TCGGCTGCGG 1.8 0.0018 E18.5 retina TGGGTTGTCT (7) 1758.9 1.7589 E18.5 retina GGATTTGGCT (3) 569.3 0.5693 E18.5 retina GGATTTGGCC (6) 16.4 0.0164 E18.5 retina TCGTCATCCG 14.6 0.0146 E18.5 retina GGATTGGGCT 5.5 0.0055 E18.5 retina TCGGCTGCGG 5.5 0.0055 E18.5 retina GGATCTGGCT (7) 3.6 0.0036 P0.5 retina TGGGTTGTCT (7) 724.2 0.7242 P0.5 retina GGATTTGGCT (3) 300.3 0.3003 P0.5 retina TCGTCATCCG 5.9 0.0059 P0.5 retina GGATCTGGCT (7) 3.9 0.0039 P0.5 retina GGATTTTGGC (8) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TCGGCTGCGG 3.9 0.0039 P0.5 retina GGATTGGGCT 2 0.002 P0.5 retina GGATTTGGCC (6) 2 0.002 P2.5 retina TGGGTTGTCT (7) 712.7 0.7127 P2.5 retina GGATTTGGCT (3) 304.4 0.3044 P2.5 retina TCGTCATCCG 8.8 0.0088 P2.5 retina GGATTGGGCT 3.5 0.0035 P2.5 retina AGACCAGAAC (6) 1.8 0.0018 P2.5 retina GGATTTTGGC (8) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCGGCTGCGG 1.8 0.0018 P4.5 retina TGGGTTGTCT (7) 754.9 0.7549 P4.5 retina GGATTTGGCT (3) 261.5 0.2615 P4.5 retina TCGTCATCCG 4 0.004 P4.5 retina CGCTACGTCG 2 0.002 P4.5 retina GGATTTTGGC (8) 2 0.002 P4.5 retina GGGATTTGGC (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TGGGTTGTCT (7) 360.1 0.3601 P6.5 retina GGATTTGGCT (3) 203.4 0.2034 P6.5 retina GGATTGGGCT 3.3 0.0033 P6.5 retina GGATTTGGCC (6) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCTGGGGTTG (5) 1.7 0.0017 P6.5 retina GGATTTTGGC (8) 1.7 0.0017 P10.5 crx- retina TGGGTTGTCT (7) 209.9 0.2099 P10.5 crx- retina GGATTTGGCT (3) 187.6 0.1876 P10.5 crx- retina TCGTCATCCG 5.6 0.0056 P10.5 crx- retina GGATTTGGCC (6) 3.7 0.0037 P10.5 crx- retina GGATTGGGCT 1.9 0.0019 P10.5 crx+ retina TGGGTTGTCT (7) 317.2 0.3172 P10.5 crx+ retina GGATTTGGCT (3) 163.4 0.1634 P10.5 crx+ retina GCTGGGGTTG (5) 5.8 0.0058 P10.5 crx+ retina TCGTCATCCG 3.8 0.0038 P10.5 crx+ retina GGGATTTGGC (2) 1.9 0.0019 P10.5 crx+ retina TCGGCTGCGG 1.9 0.0019 Adult retinal TGGGTTGTCT (7) 150 0.15 Adult retinal GGATTTGGCT (3) 68.5 0.0685 Adult retinal AGACCAGAAC (6) 1.9 0.0019 Adult retinal GGATTTTGGC (8) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL TGGGTTGTCT (7) 147.5 0.1475 ONL GGATTTGGCT (3) 74.7 0.0747 ONL GGATTTGGCC (6) 28.7 0.0287 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCTGGGGTTG (5) 1.9 0.0019 ONL GGATTTTGGC (8) 1.9 0.0019