Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341886	1110067M05Rik	RIKEN cDNA 1110067M05 gene	11		68851
Mm.341886	Thrap1	thyroid hormone receptor associated protein 1	11		327987
Mm.341886	2700033K15Rik	RIKEN cDNA 2700033K15 gene	11		72594
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCAAAAA (4) AAGCCTTAAA (3) ACAAACAATT (3) CTTACATCCG (3) GAGGTGATGC (3) 9.7 0.0097 Cb medulloblastoma AAGCAAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) TTAAAAAGAA (5) 16.1 0.0161 P8 GC+1d culture AAGCAAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) ACAAACAATT (3) GCAGGAAGAG (3) TTAAAAAGAA (5) TTGAAAAGAA (4) 12.4 0.0124 P8 GC+SHH+1d culture AAGCCTTCAA (3) TTAAAAAGAA (5) 3.5 0.0035 3T3 fibroblasts AAGCCTTCAA (3) CTTACATCCG (3) 7 0.007 E15 cortex CTTACATCCG (3) 4.9 0.0049 E12.5 retina AAGCCTTAAA (3) GAGGTGATGC (3) 3.8 0.0038 E14.5 retina AAGCAAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) TTGAAAAGAA (4) 10.8 0.0108 E16.5 retina AAGCCTTCAA (3) TTGAAAAGAA (4) 5.4 0.0054 E18.5 retina AAGCAAAAAA (4) AAGCCAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) 18.2 0.0182 P0.5 retina AAGCCTTCAA (3) 2 0.002 P2.5 retina AAGCAAAAAA (4) AAGCCAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) 14.1 0.0141 P4.5 retina AAGCCTTAAA (3) AAGCCTTCAA (3) GCAGGAAGAG (3) TTGAAAAGAA (4) 12 0.012 P6.5 retina AAGCCAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) TTGAAAAGAA (4) 6.8 0.0068 P10.5 crx- retina AAGCCTTAAA (3) ACAAACAATT (3) 5.6 0.0056 P10.5 crx+ retina AAGCCTTAAA (3) AAGCCTTCAA (3) 3.8 0.0038 Adult retinal AAGCCTTCAA (3) GCAGGAAGAG (3) 3.8 0.0038 ONL AAGCCAAAAA (4) AAGCCTTAAA (3) AAGCCTTCAA (3) GAGGTGATGC (3) 24.8 0.0248