Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34342
Spata2
spermatogenesis associated 2
2
263876
Human Homolog
SPATA2[spermatogenesis associated 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGAAAGAAA
(
2
)
1.6
0.0016
Cb medulloblastoma
GTGAAAGAAA
(
2
)
2.3
0.0023
P8 GC+1d culture
CGGTCTATCA
GTGAAAGAAA
(
2
)
GTGCCGGGGC
(
2
)
TAATTAGGTG
11.4
0.0114
P8 GC+SHH+1d culture
GTGCCGGGGC
(
2
)
TAATTAGGTG
5.8
0.0058
3T3 fibroblasts
GGCTACGAGC
(
3
)
TGCTGGCCTA
7
0.007
E15 cortex
GTGCCGGGGC
(
2
)
4.9
0.0049
P1 cortex
GTGCCGGGGC
(
2
)
4.5
0.0045
Hypothalamus
CGGTCTATCA
3.6
0.0036
E12.5 retina
GTGAAAGAAA
(
2
)
GTGCCGGGGC
(
2
)
3.8
0.0038
E14.5 retina
GTGCCGGGGC
(
2
)
3.6
0.0036
E16.5 retina
GGCTACGAGC
(
3
)
GTGCCGGGGC
(
2
)
TAATTAGGTG
5.4
0.0054
E18.5 retina
GGCTACGAGC
(
3
)
GTGAAAGAAA
(
2
)
GTGCCGGGGC
(
2
)
7.2
0.0072
P0.5 retina
TGCTGGCCTA
2
0.002
P2.5 retina
GTGAAAGAAA
(
2
)
GTGCCGGGGC
(
2
)
TAATTAGGTG
TGCTGGCCTA
8.9
0.0089
P4.5 retina
GTGAAAGAAA
(
2
)
GTGCCGGGGC
(
2
)
4
0.004
P6.5 retina
CGGTCTATCA
1.7
0.0017
P10.5 crx- retina
TAATTAGGTG
1.9
0.0019
P10.5 crx+ retina
GTGCCGGGGC
(
2
)
3.8
0.0038
Adult retinal
TAATTAGGTG
1.9
0.0019
