Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.343538	Fdft1	farnesyl diphosphate farnesyl transferase 1	14	14 3.0 cM	14137
Gene Ontology	biosynthesis | catalytic activity | cholesterol biosynthesis | endoplasmic reticulum | farnesyl-diphosphate farnesyl transferase complex | farnesyl-diphosphate farnesyltransferase activity | integral to membrane | isoprenoid biosynthesis | lipid biosynthesis | magnesium ion binding | oxidoreductase activity | transferase activity
Human Homolog	FDFT1[farnesyl-diphosphate farnesyltransferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGTGACTG (2) 3.3 0.0033 P8 Cb GC CCTGCCGTCA 1.6 0.0016 P8 Cb GC GGTCCTTGGG (4) 1.6 0.0016 Cb medulloblastoma ACAATGTAGC (2) 6.9 0.0069 Cb medulloblastoma CTCTTGGCTG (2) 2.3 0.0023 Cb medulloblastoma GGTCCTGTTC (4) 2.3 0.0023 Cb medulloblastoma GGTCCTTGGG (4) 2.3 0.0023 P8 GC+1d culture CTCTTGGCTG (2) 13.7 0.0137 P8 GC+1d culture TCCTCTCTCT (6) 6.8 0.0068 P8 GC+1d culture AGGGTGACTG (2) 4.6 0.0046 P8 GC+1d culture CCTGCCGTCA 3.4 0.0034 P8 GC+1d culture ACAATGTAGC (2) 2.3 0.0023 P8 GC+1d culture GGTCCTGTTC (4) 1.1 0.0011 P8 GC+SHH+1d culture CTCTTGGCTG (2) 14.1 0.0141 P8 GC+SHH+1d culture TCCTCTCTCT (6) 8.2 0.0082 P8 GC+SHH+1d culture AGGGTGACTG (2) 3.5 0.0035 P8 GC+SHH+1d culture CAGGTCATCA (6) 1.2 0.0012 P8 GC+SHH+1d culture GGAGGGCGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTCCTGTTC (4) 1.2 0.0012 P8 GC+SHH+1d culture GGTCCTTGGG (4) 1.2 0.0012 3T3 fibroblasts CTCTTGGCTG (2) 21 0.021 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCCTCTCTCT (6) 10.5 0.0105 3T3 fibroblasts CAGGTCATCA (6) 7 0.007 3T3 fibroblasts ACAATGTAGC (2) 3.5 0.0035 3T3 fibroblasts CCTGCCGTCA 3.5 0.0035 E15 cortex CTCTTGGCTG (2) 24.7 0.0247 E15 cortex TCCTCTCTCT (6) 9.9 0.0099 E15 cortex CCTGCCGTCA 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CTCTTGGCTG (2) 4.5 0.0045 P1 cortex TCCTCTCTCT (6) 4.5 0.0045 Hypothalamus GGAGGGCGGC (3) 3.6 0.0036 Hypothalamus CTCTTGGCTG (2) 1.8 0.0018 E14.5 retina CTCTTGGCTG (2) 3.6 0.0036 E14.5 retina AGGGTGACTG (2) 1.8 0.0018 E16.5 retina CTCTTGGCTG (2) 9.1 0.0091 E16.5 retina AGGGTGACTG (2) 3.6 0.0036 E16.5 retina TCCTCTCTCT (6) 1.8 0.0018 E18.5 retina CTCTTGGCTG (2) 5.5 0.0055 P0.5 retina TCCTCTCTCT (6) 9.8 0.0098 P0.5 retina CTCTTGGCTG (2) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GGAGGGCGGC (3) 2 0.002 P2.5 retina CTCTTGGCTG (2) 5.3 0.0053 P2.5 retina TCCTCTCTCT (6) 5.3 0.0053 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GGAGGGCGGC (3) 4 0.004 P4.5 retina AGGGTGACTG (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCCTCTCTCT (6) 2 0.002 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCCTCTCTCT (6) 3.3 0.0033 P6.5 retina ACAATGTAGC (2) 1.7 0.0017 P6.5 retina AGGGTGACTG (2) 1.7 0.0017 P6.5 retina CTCTTGGCTG (2) 1.7 0.0017 P6.5 retina GGAGGGCGGC (3) 1.7 0.0017 P10.5 crx- retina GGAGGGCGGC (3) 1.9 0.0019 P10.5 crx+ retina ACAATGTAGC (2) 3.8 0.0038 P10.5 crx+ retina CTCTTGGCTG (2) 3.8 0.0038 P10.5 crx+ retina GGAGGGCGGC (3) 1.9 0.0019 Adult retinal TCCTCTCTCT (6) 16.7 0.0167 Adult retinal ACAATGTAGC (2) 1.9 0.0019 Adult retinal CTCTTGGCTG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TCCTCTCTCT (6) 5.7 0.0057 ONL ACAATGTAGC (2) 1.9 0.0019 ONL GGTCCTTGGG (4) 1.9 0.0019