Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3444	Brd2	bromodomain containing 2	17	17 C (17 18.53 cM)	14312
Gene Ontology	cytoplasm | nucleus | nucleus | protein serine/threonine kinase activity | spermatogenesis
Human Homolog	BRD2[bromodomain containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAACTGGC ACTTTTTTTT (2) GACCAAAATA GGGAGGGAAA GGGAGGGAAG (2) GGGGAAGGAA TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 47.2 0.0472 Cb medulloblastoma AACAACTGGC ACTTTTTTTT (2) GGGAGGGAAG (2) TAAATAAAGA (5) TTAGACTCAA 23 0.023 P8 GC+1d culture ACTTTTTTTT (2) ATGCTGCGAA GAAGCTGGAG (2) GGGAGGGAAG (2) TAAATAAAGA (5) TTAGACTCAA 35.3 0.0353 P8 GC+SHH+1d culture GAAGCTGGAG (2) GGGAGGGAAG (2) TAAAATAAAG TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 28.2 0.0282 3T3 fibroblasts ATGCTGCGAA 3.5 0.0035 E15 cortex CTGGAAAAAA CTTGCACACA GACCTCAGCA (2) GGGAGGGAAG (2) GGGGAAGGAA 29.5 0.0295 P1 cortex GAAGCTGGAG (2) TAAATAAAGA (5) TTAGACTCAA 31.8 0.0318 Hypothalamus GACCTCAGCA (2) GGGAGGGAAG (2) TAAATAAAGA (5) TAAATAAATA (3) 23.5 0.0235 E12.5 retina CTGGAAAAAA GAAGCTGGAG (2) GGGAGGGAAG (2) TAAATAAAGA (5) TTAGACTCAA 30.2 0.0302 E14.5 retina AACAACTGGC CTTGCACACA GAAGCTGGAG (2) GACCAAAATA GGGAGGGAAG (2) TAAAATAAAG TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 38 0.038 E16.5 retina GAAGCTGGAG (2) GGGAGGGAAG (2) GGGGAAGGAA TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 34.3 0.0343 E18.5 retina ATGCTGCGAA CTGGAAAAAA GGCTCAGCCT TAAAATAAAG TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 43.7 0.0437 P0.5 retina CTGGAAAAAA GAAGCTGGAG (2) GGGAGGGAAG (2) TAAATAAAGA (5) 8 0.008 P2.5 retina AACAACTGGC GGGAGGGAAA GGGAGGGAAG (2) TAAAATAAAG TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 58.3 0.0583 P4.5 retina AACAACTGGC CTGGAAAAAA GAAGCTGGAG (2) GGGAGGGAAG (2) TAAATAAAGA (5) TTAGACTCAA 59.6 0.0596 P6.5 retina AACAACTGGC GGGAGGGAAG (2) GGGGAAGGAA TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 48.4 0.0484 P10.5 crx- retina GAAGCTGGAG (2) GGGAGGGAAG (2) GGGGAAGGAA TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 24.3 0.0243 P10.5 crx+ retina AACAACTGGC CTTGCACACA GAAGCTGGAG (2) GGGAGGGAAA GGGAGGGAAG (2) TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 24.9 0.0249 Adult retinal AACAACTGGC ATGCTGCGAA GAAGCTGGAG (2) GACCAAAATA TAAATAAAGA (5) 9.5 0.0095 ONL ACTTTTTTTT (2) CTGGAAAAAA GGGAGGGAAG (2) TAAATAAAGA (5) TAAATAAATA (3) TTAGACTCAA 36.4 0.0364