Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34456	2400003N08Rik	RIKEN cDNA 2400003N08 gene	5		71954
Human Homolog	SDS3[likely ortholog of mouse Sds3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCATCATT 3.3 0.0033 P8 Cb GC CAGAGGGTTC (3) 1.6 0.0016 P8 Cb GC GCCCTCTTGC 1.6 0.0016 P8 Cb GC GGGCAGGGTT (6) 1.6 0.0016 Cb medulloblastoma GGGCAGGGTT (6) 9.2 0.0092 P8 GC+1d culture GGGCAGGGTT (6) 8 0.008 P8 GC+1d culture GCCCTCTTGC 6.8 0.0068 P8 GC+1d culture CAGAGGGTTC (3) 2.3 0.0023 P8 GC+1d culture CAGACTGTTC (3) 1.1 0.0011 P8 GC+1d culture CTGCAGCTGC (5) 1.1 0.0011 P8 GC+1d culture CTTCCGGGCC 1.1 0.0011 P8 GC+1d culture GAGGACCTGA (4) 1.1 0.0011 P8 GC+SHH+1d culture GGGCAGGGTT (6) 4.7 0.0047 P8 GC+SHH+1d culture GCCCTCTTGC 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCCTCTTGC 3.5 0.0035 3T3 fibroblasts GGGCAGGGTT (6) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCCCTCTTGC 4.5 0.0045 P1 cortex GGGCAGGGTT (6) 4.5 0.0045 Hypothalamus CAGACTGTTC (3) 25.4 0.0254 Hypothalamus GGGCAGGGTT (6) 3.6 0.0036 Hypothalamus CTGCAGCTGC (5) 1.8 0.0018 E12.5 retina CTGCAGCTGC (5) 7.5 0.0075 E12.5 retina CACCATCATT 1.9 0.0019 E12.5 retina CAGAGGGTTC (3) 1.9 0.0019 E12.5 retina GGGCAGGGTT (6) 1.9 0.0019 E14.5 retina GCCCTCTTGC 5.5 0.0055 E14.5 retina CAGACTGTTC (3) 3.6 0.0036 E14.5 retina CTGCAGCTGC (5) 1.8 0.0018 E16.5 retina GGGCAGGGTT (6) 5.4 0.0054 E16.5 retina GCCCTCTTGC 3.6 0.0036 E16.5 retina ACCAGAAAAA (5) 1.8 0.0018 E16.5 retina CAGACTGTTC (3) 1.8 0.0018 E16.5 retina GGAGGTGGGT (3) 1.8 0.0018 E18.5 retina GGGCAGGGTT (6) 12.7 0.0127 E18.5 retina ACCAGAAAAA (5) 7.3 0.0073 E18.5 retina GCCCTCTTGC 3.6 0.0036 P0.5 retina GCCCTCTTGC 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CAGACTGTTC (3) 2 0.002 P0.5 retina GGGCAGGGTT (6) 2 0.002 P2.5 retina GGGCAGGGTT (6) 7 0.007 P2.5 retina CAGAGGGTTC (3) 1.8 0.0018 P2.5 retina CTTCCGGGCC 1.8 0.0018 P2.5 retina GCCCTCTTGC 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GGGCAGGGTT (6) 9.9 0.0099 P4.5 retina ACCAGAAAAA (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GGGCAGGGTT (6) 6.7 0.0067 P6.5 retina GCCCTCTTGC 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CTTCCGGGCC 1.7 0.0017 P10.5 crx- retina CAGAGGGTTC (3) 3.7 0.0037 P10.5 crx- retina GAGGACCTGA (4) 3.7 0.0037 P10.5 crx- retina GGGCAGGGTT (6) 3.7 0.0037 P10.5 crx- retina GGAGGTGGGT (3) 1.9 0.0019 P10.5 crx+ retina GCCCTCTTGC 3.8 0.0038 Adult retinal GCCCTCTTGC 11.1 0.0111 Adult retinal GGGCAGGGTT (6) 5.6 0.0056 Adult retinal CAGAGGGTTC (3) 1.9 0.0019 Adult retinal GGAGGTGGGT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL CAGACTGTTC (3) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GAGGACCTGA (4) 3.8 0.0038 ONL GCCCTCTTGC 3.8 0.0038 ONL GGGCAGGGTT (6) 1.9 0.0019