Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34483
E130107N23Rik
RIKEN cDNA E130107N23 gene
9
272589
Human Homolog
MGC10233[hypothetical protein MGC10233]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCTGGTGG (
15
)
13.1
0.0131
P8 Cb GC
GGAAACAGTG (
6
)
11.4
0.0114
P8 Cb GC
AAGGTCTATT
3.3
0.0033
P8 Cb GC
GGCTGAGAAC (
2
)
1.6
0.0016
Cb medulloblastoma
GGAAACAGTG (
6
)
23.1
0.0231
Cb medulloblastoma
CTGCTGGTGG (
15
)
11.6
0.0116
Cb medulloblastoma
TGGCAGGTGT
(
2
)
9.2
0.0092
P8 GC+1d culture
GGAAACAGTG (
6
)
43.4
0.0434
P8 GC+1d culture
CTGCTGGTGG (
15
)
16
0.016
P8 GC+1d culture
TGGCAGGTGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAACAGTG (
6
)
28.1
0.0281
P8 GC+SHH+1d culture
CTGCTGGTGG (
15
)
10.5
0.0105
P8 GC+SHH+1d culture
AAGGTCTATT
3.5
0.0035
P8 GC+SHH+1d culture
GGCTGAGAAC (
2
)
1.2
0.0012
3T3 fibroblasts
CTGCTGGTGG (
15
)
59.6
0.0596
E15 cortex
GGAAACAGTG (
6
)
19.8
0.0198
E15 cortex
CTGCTGGTGG (
15
)
9.9
0.0099
E15 cortex
GGCTGAGAAC (
2
)
9.9
0.0099
P1 cortex
GGAAACAGTG (
6
)
18.2
0.0182
P1 cortex
CTGCTGGTGG (
15
)
4.5
0.0045
P1 cortex
TGGCAGGTGT
(
2
)
4.5
0.0045
Hypothalamus
CTGCTGGTGG (
15
)
7.2
0.0072
Hypothalamus
AAGGTCTATT
1.8
0.0018
E12.5 retina
GGCTGAGAAC (
2
)
3.8
0.0038
E12.5 retina
TGGCAGGTGT
(
2
)
1.9
0.0019
E14.5 retina
AAGGTCTATT
1.8
0.0018
E14.5 retina
CTGCTGGTGG (
15
)
1.8
0.0018
E14.5 retina
GGCTGAGAAC (
2
)
1.8
0.0018
E16.5 retina
TGGCAGGTGT
(
2
)
1.8
0.0018
E18.5 retina
AAGGTCTATT
3.6
0.0036
E18.5 retina
CTGCTGGTGG (
15
)
3.6
0.0036
E18.5 retina
GGAAACAGTG (
6
)
1.8
0.0018
P0.5 retina
CTGCTGGTGG (
15
)
9.8
0.0098
P0.5 retina
GGAAACAGTG (
6
)
3.9
0.0039
P0.5 retina
TGGCAGGTGT
(
2
)
2
0.002
P2.5 retina
CTGCTGGTGG (
15
)
5.3
0.0053
P2.5 retina
GGAAACAGTG (
6
)
3.5
0.0035
P2.5 retina
AAGGTCTATT
1.8
0.0018
P2.5 retina
GGCTGAGAAC (
2
)
1.8
0.0018
P2.5 retina
TGGCAGGTGT
(
2
)
1.8
0.0018
P4.5 retina
AAGGTCTATT
4
0.004
P4.5 retina
GGAAACAGTG (
6
)
4
0.004
P4.5 retina
GGCTGAGAAC (
2
)
4
0.004
P4.5 retina
CTGCTGGTGG (
15
)
2
0.002
P6.5 retina
GGCTGAGAAC (
2
)
8.3
0.0083
P6.5 retina
CTGCTGGTGG (
15
)
6.7
0.0067
P6.5 retina
GGAAACAGTG (
6
)
5
0.005
P6.5 retina
TGGCAGGTGT
(
2
)
1.7
0.0017
P10.5 crx- retina
CTGCTGGTGG (
15
)
11.1
0.0111
P10.5 crx- retina
TGGCAGGTGT
(
2
)
5.6
0.0056
P10.5 crx- retina
AAGGTCTATT
3.7
0.0037
P10.5 crx- retina
GGAAACAGTG (
6
)
1.9
0.0019
P10.5 crx- retina
TAAAACTAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGAAACAGTG (
6
)
9.6
0.0096
P10.5 crx+ retina
AAGGTCTATT
3.8
0.0038
P10.5 crx+ retina
CTGCTGGTGG (
15
)
3.8
0.0038
P10.5 crx+ retina
TGGCAGGTGT
(
2
)
1.9
0.0019
Adult retinal
CTGCTGGTGG (
15
)
20.4
0.0204
Adult retinal
GGAAACAGTG (
6
)
3.7
0.0037
Adult retinal
AAGGTCTATT
1.9
0.0019
Adult retinal
GGCTGAGAAC (
2
)
1.9
0.0019
ONL
CTGCTGGTGG (
15
)
7.7
0.0077
ONL
GGAAACAGTG (
6
)
7.7
0.0077
ONL
GGCTGAGAAC (
2
)
3.8
0.0038
ONL
TAAAACTAAA
(
2
)
1.9
0.0019
