Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.344921
D6Ertd349e
DNA segment, Chr 6, ERATO Doi 349, expressed
6
6 38.0 cM
232227
Human Homolog
IQSEC1[IQ motif and Sec7 domain 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGACCTGGCA
TTCCTGTGCC
(
2
)
6.6
0.0066
Cb medulloblastoma
TGACCTGGCA
TGTCCTAGAG
TTCCTGTGCC
(
2
)
16.2
0.0162
P8 GC+1d culture
TGACCTGGCA
TTCCTGTGCC
(
2
)
12.5
0.0125
P8 GC+SHH+1d culture
TGACCTGGCA
TTCCTGTGCC
(
2
)
12.8
0.0128
3T3 fibroblasts
TTCCTGTGCC
(
2
)
3.5
0.0035
E15 cortex
TTCCTGTGCC
(
2
)
4.9
0.0049
P1 cortex
TGACCTGGCA
4.5
0.0045
Hypothalamus
TGACCTGGCA
TGTCCTAGAG
TTCCTGTGCC
(
2
)
19.9
0.0199
E12.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
5.7
0.0057
E14.5 retina
GAACTGTGGG
TTCCTGTGCC
(
2
)
7.2
0.0072
E16.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
16.3
0.0163
E18.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
7.2
0.0072
P0.5 retina
TGTCCTAGAG
TTCCTGTGCC
(
2
)
13.8
0.0138
P2.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
35.2
0.0352
P4.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
6
0.006
P6.5 retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
13.3
0.0133
P10.5 crx- retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
9.3
0.0093
P10.5 crx+ retina
TGACCTGGCA
TTCCTGTGCC
(
2
)
7.6
0.0076
Adult retinal
TGACCTGGCA
TGTCCTAGAG
TTCCTGTGCC
(
2
)
14.9
0.0149
ONL
GAACTGTGGG
TGACCTGGCA
3.8
0.0038
