Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.345134	Bscl2	Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	19	19 4.0 cM	14705
Gene Ontology	integral to membrane
Human Homolog	BSCL2[Bernardinelli-Seip congenital lipodystrophy 2 (seipin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 158 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAATGGCA (10) 8.2 0.0082 P8 Cb GC AGGGAATCTG (4) 4.9 0.0049 P8 Cb GC GAGCCTGTAA (4) 4.9 0.0049 P8 Cb GC GGGGTTAAGA (5) 3.3 0.0033 P8 Cb GC AAGCTGAATC 1.6 0.0016 P8 Cb GC CTGCTTTCCC (4) 1.6 0.0016 P8 Cb GC CTTTTCTTAT (3) 1.6 0.0016 P8 Cb GC TGGTGTTTGT (7) 1.6 0.0016 Cb medulloblastoma GAGAATGGCA (10) 23.1 0.0231 Cb medulloblastoma GAGCCTGTAA (4) 6.9 0.0069 Cb medulloblastoma TGTGCGAGAG (3) 4.6 0.0046 Cb medulloblastoma AGGGAATCTG (4) 2.3 0.0023 Cb medulloblastoma GCTGGGGTAC (2) 2.3 0.0023 Cb medulloblastoma GGGGTTAAGA (5) 2.3 0.0023 Cb medulloblastoma TGGTGTTTGT (7) 2.3 0.0023 P8 GC+1d culture GAGCCTGTAA (4) 8 0.008 P8 GC+1d culture ACCTGCGCCT 6.8 0.0068 P8 GC+1d culture AGGGAATCTG (4) 6.8 0.0068 P8 GC+1d culture GAGAATGGCA (10) 5.7 0.0057 P8 GC+1d culture GGGGTTAAGA (5) 3.4 0.0034 P8 GC+1d culture GGCTGGGAGG (6) 2.3 0.0023 P8 GC+1d culture AGGAAGAGAA (10) 1.1 0.0011 P8 GC+1d culture GAGAGGAGGA (6) 1.1 0.0011 P8 GC+1d culture GGCAAAAAGT (4) 1.1 0.0011 P8 GC+1d culture TGTGCGAGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture GAGCCTGTAA (4) 10.5 0.0105 P8 GC+SHH+1d culture AGGGAATCTG (4) 8.2 0.0082 P8 GC+SHH+1d culture AAGCTGAATC 2.3 0.0023 P8 GC+SHH+1d culture GGCTGGGAGG (6) 2.3 0.0023 P8 GC+SHH+1d culture GGTCAGAGAG 2.3 0.0023 P8 GC+SHH+1d culture TGTGCGAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGTTCCCCT (6) 1.2 0.0012 P8 GC+SHH+1d culture GAGAATGGCA (10) 1.2 0.0012 P8 GC+SHH+1d culture GCTGGGGTAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAAAAGT (4) 1.2 0.0012 3T3 fibroblasts AGGGAATCTG (4) 7 0.007 3T3 fibroblasts GAGCCTGTAA (4) 7 0.007 3T3 fibroblasts TTGTGGTAGG (2) 7 0.007 3T3 fibroblasts ACCTGCGCCT 3.5 0.0035 E15 cortex AGGGAATCTG (4) 9.9 0.0099 E15 cortex GAGCCTGTAA (4) 9.9 0.0099 E15 cortex GAGAGGAGGA (6) 4.9 0.0049 E15 cortex TGTGCGAGAG (3) 4.9 0.0049 P1 cortex ACCTGCGCCT 9.1 0.0091 P1 cortex AGGAAGAGAA (10) 4.5 0.0045 P1 cortex AGGGAATCTG (4) 4.5 0.0045 P1 cortex CTGCTTTCCC (4) 4.5 0.0045 P1 cortex CTGTTCCCCT (6) 4.5 0.0045 P1 cortex GAGCCTGTAA (4) 4.5 0.0045 P1 cortex GGTCAGAGAG 4.5 0.0045 P1 cortex TTGTGGTAGG (2) 4.5 0.0045 Hypothalamus GAGAATGGCA (10) 18.1 0.0181 Hypothalamus GGGGTTAAGA (5) 3.6 0.0036 Hypothalamus CTGCTTTCCC (4) 1.8 0.0018 Hypothalamus CTGTTCCCCT (6) 1.8 0.0018 Hypothalamus GCTGGGGTAC (2) 1.8 0.0018 Hypothalamus GGCAAAAAGT (4) 1.8 0.0018 Hypothalamus GGTCAGAGAG 1.8 0.0018 Hypothalamus TCCTTTGCAA 1.8 0.0018 E12.5 retina CCACTTAACT 5.6 0.0056 E12.5 retina GGCTGGGAGG (6) 5.6 0.0056 E12.5 retina CTGTTCCCCT (6) 3.8 0.0038 E12.5 retina CTTTTCTTAT (3) 3.8 0.0038 E12.5 retina TGTGCGAGAG (3) 3.8 0.0038 E12.5 retina AACTGATCTT 1.9 0.0019 E12.5 retina AGGGAATCTG (4) 1.9 0.0019 E12.5 retina CTGCTTTCCC (4) 1.9 0.0019 E12.5 retina GAGAATGGCA (10) 1.9 0.0019 E12.5 retina GGGGTTAAGA (5) 1.9 0.0019 E14.5 retina AGGGAATCTG (4) 3.6 0.0036 E14.5 retina GAGAATGGCA (10) 3.6 0.0036 E14.5 retina AACTGATCTT 1.8 0.0018 E14.5 retina CCACTTAACT 1.8 0.0018 E14.5 retina CTGTTCCCCT (6) 1.8 0.0018 E14.5 retina CTTTTCTTAT (3) 1.8 0.0018 E14.5 retina GAGAGGAGGA (6) 1.8 0.0018 E14.5 retina GGGGTTAAGA (5) 1.8 0.0018 E14.5 retina TGTGCGAGAG (3) 1.8 0.0018 E16.5 retina GAGAATGGCA (10) 5.4 0.0054 E16.5 retina AGGGAATCTG (4) 3.6 0.0036 E16.5 retina CTGCTTTCCC (4) 3.6 0.0036 E16.5 retina CTTTTCTTAT (3) 3.6 0.0036 E16.5 retina GCTGGGGTAC (2) 3.6 0.0036 E16.5 retina AACTGATCTT 1.8 0.0018 E16.5 retina CTGTTCCCCT (6) 1.8 0.0018 E16.5 retina TGTGCGAGAG (3) 1.8 0.0018 E18.5 retina GAGAATGGCA (10) 14.6 0.0146 E18.5 retina GCTGGGGTAC (2) 7.3 0.0073 E18.5 retina CTTTTCTTAT (3) 5.5 0.0055 E18.5 retina GGGGTTAAGA (5) 5.5 0.0055 E18.5 retina GAGCCTGTAA (4) 3.6 0.0036 E18.5 retina AGGGAATCTG (4) 1.8 0.0018 E18.5 retina CTGCTTTCCC (4) 1.8 0.0018 E18.5 retina GGTCAGAGAG 1.8 0.0018 P0.5 retina GAGAATGGCA (10) 9.8 0.0098 P0.5 retina AGGGAATCTG (4) 7.9 0.0079 P0.5 retina TGTGCGAGAG (3) 5.9 0.0059 P0.5 retina ACCTGCGCCT 3.9 0.0039 P0.5 retina CTGTTCCCCT (6) 3.9 0.0039 P0.5 retina CTTTTCTTAT (3) 3.9 0.0039 P0.5 retina GAGCCTGTAA (4) 3.9 0.0039 P0.5 retina GGCTGGGAGG (6) 3.9 0.0039 P0.5 retina GCCAAGGGTA (4) 2 0.002 P0.5 retina GCTGGGGTAC (2) 2 0.002 P0.5 retina GGTCAGAGAG 2 0.002 P2.5 retina GAGAATGGCA (10) 10.6 0.0106 P2.5 retina AGGGAATCTG (4) 7 0.007 P2.5 retina GAGCCTGTAA (4) 7 0.007 P2.5 retina GCTGGGGTAC (2) 5.3 0.0053 P2.5 retina TGTGCGAGAG (3) 5.3 0.0053 P2.5 retina CTGTTCCCCT (6) 3.5 0.0035 P2.5 retina AAGCTGAATC 1.8 0.0018 P2.5 retina CTGCTTTCCC (4) 1.8 0.0018 P2.5 retina CTTTTCTTAT (3) 1.8 0.0018 P2.5 retina GGGGTTAAGA (5) 1.8 0.0018 P2.5 retina TGGTGTTTGT (7) 1.8 0.0018 P4.5 retina GAGAATGGCA (10) 13.9 0.0139 P4.5 retina GAGCCTGTAA (4) 11.9 0.0119 P4.5 retina AGGGAATCTG (4) 5.9 0.0059 P4.5 retina CTTTTCTTAT (3) 5.9 0.0059 P4.5 retina GGGGTTAAGA (5) 4 0.004 P4.5 retina GCCAAGGGTA (4) 2 0.002 P6.5 retina GAGAATGGCA (10) 10 0.01 P6.5 retina GAGCCTGTAA (4) 6.7 0.0067 P6.5 retina GCTGGGGTAC (2) 5 0.005 P6.5 retina TGTGCGAGAG (3) 3.3 0.0033 P6.5 retina AGGAAGAGAA (10) 1.7 0.0017 P6.5 retina AGGGAATCTG (4) 1.7 0.0017 P6.5 retina GGCAAAAAGT (4) 1.7 0.0017 P6.5 retina GGCTGGGAGG (6) 1.7 0.0017 P6.5 retina TCCTTTGCAA 1.7 0.0017 P10.5 crx- retina TGTGCGAGAG (3) 7.4 0.0074 P10.5 crx- retina GAGCCTGTAA (4) 3.7 0.0037 P10.5 crx- retina AGGGAATCTG (4) 1.9 0.0019 P10.5 crx- retina GAGAATGGCA (10) 1.9 0.0019 P10.5 crx- retina GCTGGGGTAC (2) 1.9 0.0019 P10.5 crx- retina TCCTTTGCAA 1.9 0.0019 P10.5 crx+ retina GAGCCTGTAA (4) 5.8 0.0058 P10.5 crx+ retina TGTGCGAGAG (3) 5.8 0.0058 P10.5 crx+ retina GAGAATGGCA (10) 3.8 0.0038 P10.5 crx+ retina AAGCTGAATC 1.9 0.0019 P10.5 crx+ retina GGCTGGGAGG (6) 1.9 0.0019 Adult retinal GAGAATGGCA (10) 9.3 0.0093 Adult retinal AGGGAATCTG (4) 3.7 0.0037 Adult retinal CTGCTTTCCC (4) 3.7 0.0037 Adult retinal GGGGTTAAGA (5) 3.7 0.0037 Adult retinal TCCTTTGCAA 3.7 0.0037 Adult retinal ACCTGCGCCT 1.9 0.0019 Adult retinal CCACTTAACT 1.9 0.0019 Adult retinal GAGCCTGTAA (4) 1.9 0.0019 ONL CCACTTAACT 17.2 0.0172 ONL AGGGAATCTG (4) 9.6 0.0096 ONL GAGAATGGCA (10) 5.7 0.0057 ONL GAGCCTGTAA (4) 5.7 0.0057 ONL TGTGCGAGAG (3) 3.8 0.0038 ONL AAGCTGAATC 1.9 0.0019 ONL GCCAAGGGTA (4) 1.9 0.0019 ONL GCTGGGGTAC (2) 1.9 0.0019