Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.345134	Bscl2	Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	19	19 4.0 cM	14705
Gene Ontology	integral to membrane
Human Homolog	BSCL2[Bernardinelli-Seip congenital lipodystrophy 2 (seipin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGAATCTG 4.9 0.0049 P8 Cb GC GAGCCTGTAA (4) 4.9 0.0049 P8 Cb GC AAGCTGAATC 1.6 0.0016 P8 Cb GC TGGTGTTTGT (5) 1.6 0.0016 Cb medulloblastoma GAGCCTGTAA (4) 6.9 0.0069 Cb medulloblastoma AGGGAATCTG 2.3 0.0023 Cb medulloblastoma GCTGGGGTAC 2.3 0.0023 Cb medulloblastoma TGGTGTTTGT (5) 2.3 0.0023 P8 GC+1d culture GAGCCTGTAA (4) 8 0.008 P8 GC+1d culture ACCTGCGCCT 6.8 0.0068 P8 GC+1d culture AGGGAATCTG 6.8 0.0068 P8 GC+1d culture GAGAGGAGGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GAGCCTGTAA (4) 10.5 0.0105 P8 GC+SHH+1d culture AGGGAATCTG 8.2 0.0082 P8 GC+SHH+1d culture AAGCTGAATC 2.3 0.0023 P8 GC+SHH+1d culture GGTCAGAGAG 2.3 0.0023 P8 GC+SHH+1d culture GCTGGGGTAC 1.2 0.0012 3T3 fibroblasts AGGGAATCTG 7 0.007 3T3 fibroblasts GAGCCTGTAA (4) 7 0.007 3T3 fibroblasts TTGTGGTAGG 7 0.007 3T3 fibroblasts ACCTGCGCCT 3.5 0.0035 E15 cortex AGGGAATCTG 9.9 0.0099 E15 cortex GAGCCTGTAA (4) 9.9 0.0099 E15 cortex GAGAGGAGGA (3) 4.9 0.0049 P1 cortex ACCTGCGCCT 9.1 0.0091 P1 cortex AGGGAATCTG 4.5 0.0045 P1 cortex GAGCCTGTAA (4) 4.5 0.0045 P1 cortex GGTCAGAGAG 4.5 0.0045 P1 cortex TTGTGGTAGG 4.5 0.0045 Hypothalamus GCTGGGGTAC 1.8 0.0018 Hypothalamus GGTCAGAGAG 1.8 0.0018 E12.5 retina CCACTTAACT 5.6 0.0056 E12.5 retina AACTGATCTT 1.9 0.0019 E12.5 retina AGGGAATCTG 1.9 0.0019 E14.5 retina AGGGAATCTG 3.6 0.0036 E14.5 retina AACTGATCTT 1.8 0.0018 E14.5 retina CCACTTAACT 1.8 0.0018 E14.5 retina GAGAGGAGGA (3) 1.8 0.0018 E16.5 retina AGGGAATCTG 3.6 0.0036 E16.5 retina GCTGGGGTAC 3.6 0.0036 E16.5 retina AACTGATCTT 1.8 0.0018 E18.5 retina GCTGGGGTAC 7.3 0.0073 E18.5 retina GAGCCTGTAA (4) 3.6 0.0036 E18.5 retina AGGGAATCTG 1.8 0.0018 E18.5 retina GGTCAGAGAG 1.8 0.0018 P0.5 retina AGGGAATCTG 7.9 0.0079 P0.5 retina ACCTGCGCCT 3.9 0.0039 P0.5 retina GAGCCTGTAA (4) 3.9 0.0039 P0.5 retina GCCAAGGGTA (3) 2 0.002 P0.5 retina GCTGGGGTAC 2 0.002 P0.5 retina GGTCAGAGAG 2 0.002 P2.5 retina AGGGAATCTG 7 0.007 P2.5 retina GAGCCTGTAA (4) 7 0.007 P2.5 retina GCTGGGGTAC 5.3 0.0053 P2.5 retina AAGCTGAATC 1.8 0.0018 P2.5 retina TGGTGTTTGT (5) 1.8 0.0018 P4.5 retina GAGCCTGTAA (4) 11.9 0.0119 P4.5 retina AGGGAATCTG 5.9 0.0059 P4.5 retina GCCAAGGGTA (3) 2 0.002 P6.5 retina GAGCCTGTAA (4) 6.7 0.0067 P6.5 retina GCTGGGGTAC 5 0.005 P6.5 retina AGGGAATCTG 1.7 0.0017 P10.5 crx- retina GAGCCTGTAA (4) 3.7 0.0037 P10.5 crx- retina AGGGAATCTG 1.9 0.0019 P10.5 crx- retina GCTGGGGTAC 1.9 0.0019 P10.5 crx+ retina GAGCCTGTAA (4) 5.8 0.0058 P10.5 crx+ retina AAGCTGAATC 1.9 0.0019 Adult retinal AGGGAATCTG 3.7 0.0037 Adult retinal ACCTGCGCCT 1.9 0.0019 Adult retinal CCACTTAACT 1.9 0.0019 Adult retinal GAGCCTGTAA (4) 1.9 0.0019 ONL CCACTTAACT 17.2 0.0172 ONL AGGGAATCTG 9.6 0.0096 ONL GAGCCTGTAA (4) 5.7 0.0057 ONL AAGCTGAATC 1.9 0.0019 ONL GCCAAGGGTA (3) 1.9 0.0019 ONL GCTGGGGTAC 1.9 0.0019