Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34695	Arpc1a	actin related protein 2/3 complex, subunit 1A	5		56443
Gene Ontology	actin binding | actin cytoskeleton | actin filament organization | Arp2/3 protein complex | cellular morphogenesis
Human Homolog	ARPC1A[actin related protein 2/3 complex, subunit 1A, 41kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGCTATG (4) 11.4 0.0114 P8 Cb GC CTTTTAATCC (33) 3.3 0.0033 P8 Cb GC GACAAGAGGG (3) 3.3 0.0033 P8 Cb GC AGGAACAGGA (4) 1.6 0.0016 P8 Cb GC CTGGAAGGGA (2) 1.6 0.0016 Cb medulloblastoma TTTTGCTATG (4) 16.2 0.0162 Cb medulloblastoma AAGAACAGGA (2) 2.3 0.0023 Cb medulloblastoma AGGAACAGGA (4) 2.3 0.0023 Cb medulloblastoma GCTCCATCAA (2) 2.3 0.0023 Cb medulloblastoma GGGTCAGTTT 2.3 0.0023 P8 GC+1d culture AGGAACAGGA (4) 13.7 0.0137 P8 GC+1d culture TTTTGCTATG (4) 10.3 0.0103 P8 GC+1d culture AAGAACAGGA (2) 5.7 0.0057 P8 GC+1d culture CTTTTAATCC (33) 1.1 0.0011 P8 GC+1d culture GACAAGAGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGCTATG (4) 9.4 0.0094 P8 GC+SHH+1d culture AGGAACAGGA (4) 4.7 0.0047 P8 GC+SHH+1d culture AAGAACAGGA (2) 3.5 0.0035 P8 GC+SHH+1d culture CTTTTAATCC (33) 1.2 0.0012 3T3 fibroblasts AGGAACAGGA (4) 17.5 0.0175 E15 cortex AGGAACAGGA (4) 19.8 0.0198 P1 cortex AAGAACAGGA (2) 4.5 0.0045 P1 cortex AGGAACAGGA (4) 4.5 0.0045 P1 cortex CTGGAAGGGA (2) 4.5 0.0045 P1 cortex CTTTTAATCC (33) 4.5 0.0045 P1 cortex TTTTGCTATG (4) 4.5 0.0045 Hypothalamus TTTTGCTATG (4) 12.7 0.0127 Hypothalamus AAGAACAGGA (2) 7.2 0.0072 Hypothalamus AGGAACAGGA (4) 3.6 0.0036 Hypothalamus AGTCAGACAA (3) 1.8 0.0018 Hypothalamus CCAGTGGGAA (7) 1.8 0.0018 Hypothalamus GACAAGAGGG (3) 1.8 0.0018 Hypothalamus GCTCCATCAA (2) 1.8 0.0018 E12.5 retina TTTTGCTATG (4) 9.4 0.0094 E12.5 retina AGGAACAGGA (4) 7.5 0.0075 E12.5 retina AAGAACAGGA (2) 1.9 0.0019 E12.5 retina CTTTTAATCC (33) 1.9 0.0019 E14.5 retina AGGAACAGGA (4) 1.8 0.0018 E14.5 retina CCAGTGGGAA (7) 1.8 0.0018 E14.5 retina CTTTTAATCC (33) 1.8 0.0018 E14.5 retina GACAAGAGGG (3) 1.8 0.0018 E14.5 retina GCTCCATCAA (2) 1.8 0.0018 E14.5 retina TTTTGCTATG (4) 1.8 0.0018 E16.5 retina AGGAACAGGA (4) 7.2 0.0072 E16.5 retina CTTTTAATCC (33) 7.2 0.0072 E16.5 retina TTTTGCTATG (4) 5.4 0.0054 E16.5 retina AAGAACAGGA (2) 1.8 0.0018 E16.5 retina GACAAGAGGG (3) 1.8 0.0018 E16.5 retina GGGTCAGTTT 1.8 0.0018 E18.5 retina TTTTGCTATG (4) 12.7 0.0127 E18.5 retina AGGAACAGGA (4) 3.6 0.0036 E18.5 retina AGTCAGACAA (3) 1.8 0.0018 P0.5 retina TTTTGCTATG (4) 3.9 0.0039 P0.5 retina AGGAACAGGA (4) 2 0.002 P0.5 retina CCAGTGGGAA (7) 2 0.002 P2.5 retina AGGAACAGGA (4) 7 0.007 P2.5 retina AAGAACAGGA (2) 1.8 0.0018 P2.5 retina AGTCAGACAA (3) 1.8 0.0018 P2.5 retina TGTGCTAAAA 1.8 0.0018 P2.5 retina TTTTGCTATG (4) 1.8 0.0018 P4.5 retina AAGAACAGGA (2) 2 0.002 P4.5 retina AGGAACAGGA (4) 2 0.002 P4.5 retina CCAGTGGGAA (7) 2 0.002 P4.5 retina CTGGAAGGGA (2) 2 0.002 P4.5 retina TTTTGCTATG (4) 2 0.002 P6.5 retina AGGAACAGGA (4) 11.7 0.0117 P6.5 retina TTTTGCTATG (4) 3.3 0.0033 P10.5 crx- retina AGGAACAGGA (4) 7.4 0.0074 P10.5 crx- retina TTTTGCTATG (4) 7.4 0.0074 P10.5 crx- retina CTTTTAATCC (33) 3.7 0.0037 P10.5 crx- retina GGGTCAGTTT 1.9 0.0019 P10.5 crx+ retina AGGAACAGGA (4) 7.7 0.0077 P10.5 crx+ retina TTTTGCTATG (4) 3.8 0.0038 P10.5 crx+ retina GGGTCAGTTT 1.9 0.0019 Adult retinal AAGAACAGGA (2) 3.7 0.0037 Adult retinal CTTTTAATCC (33) 3.7 0.0037 Adult retinal AGGAACAGGA (4) 1.9 0.0019 Adult retinal CCAGTGGGAA (7) 1.9 0.0019 Adult retinal TTTTGCTATG (4) 1.9 0.0019 ONL TTTTGCTATG (4) 7.7 0.0077 ONL CTTTTAATCC (33) 5.7 0.0057 ONL TGTGCTAAAA 3.8 0.0038