Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34701	Pum1	pumilio 1 (Drosophila)	4	4 D2.3	80912
Mm.34701	2810017D21Rik	RIKEN cDNA 2810017D21 gene	4		72638
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTGGTTT (3) 9.8 0.0098 P8 Cb GC TGGACACTTT (2) 9.8 0.0098 P8 Cb GC AGAGAATACC (2) 1.6 0.0016 P8 Cb GC TTATGTGTAA (3) 1.6 0.0016 Cb medulloblastoma TTATGTGTAA (3) 6.9 0.0069 Cb medulloblastoma TGGACACTTT (2) 4.6 0.0046 Cb medulloblastoma CCTGTGGTTT (3) 2.3 0.0023 Cb medulloblastoma TTCCTGCTGC (2) 2.3 0.0023 P8 GC+1d culture AGAGAATACC (2) 4.6 0.0046 P8 GC+1d culture CCTGTGGTTT (3) 4.6 0.0046 P8 GC+1d culture TTATGTGTAA (3) 1.1 0.0011 P8 GC+1d culture TTCCTGCTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTGTGGTTT (3) 4.7 0.0047 P8 GC+SHH+1d culture TGGACACTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTATGTGTAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AGAGAATACC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCCTGCTGC (2) 1.2 0.0012 E15 cortex CCTGTGGTTT (3) 9.9 0.0099 E15 cortex AGAGAATACC (2) 4.9 0.0049 E15 cortex TGGACACTTT (2) 4.9 0.0049 Hypothalamus TCCTATCATT (3) 1.8 0.0018 E12.5 retina CCTGTGGTTT (3) 5.6 0.0056 E12.5 retina TGGACACTTT (2) 3.8 0.0038 E14.5 retina CCTGTGGTTT (3) 9.1 0.0091 E14.5 retina TCCTATCATT (3) 3.6 0.0036 E14.5 retina TTATGTGTAA (3) 1.8 0.0018 E16.5 retina CCTGTGGTTT (3) 12.7 0.0127 E16.5 retina TGGACACTTT (2) 3.6 0.0036 E18.5 retina CCTGTGGTTT (3) 3.6 0.0036 E18.5 retina TGGACACTTT (2) 1.8 0.0018 P0.5 retina CCTGTGGTTT (3) 3.9 0.0039 P0.5 retina TGGACACTTT (2) 3.9 0.0039 P0.5 retina TTCCTGCTGC (2) 3.9 0.0039 P0.5 retina AGAGAATACC (2) 2 0.002 P0.5 retina TTATGTGTAA (3) 2 0.002 P2.5 retina CCTGTGGTTT (3) 8.8 0.0088 P2.5 retina TTATGTGTAA (3) 5.3 0.0053 P2.5 retina TGGACACTTT (2) 3.5 0.0035 P2.5 retina AGAGAATACC (2) 1.8 0.0018 P4.5 retina CCTGTGGTTT (3) 7.9 0.0079 P4.5 retina TGGACACTTT (2) 7.9 0.0079 P6.5 retina CCTGTGGTTT (3) 10 0.01 P6.5 retina TGGACACTTT (2) 8.3 0.0083 P6.5 retina AGAGAATACC (2) 1.7 0.0017 P10.5 crx- retina CCTGTGGTTT (3) 16.7 0.0167 P10.5 crx- retina AGAGAATACC (2) 1.9 0.0019 P10.5 crx- retina TGGACACTTT (2) 1.9 0.0019 P10.5 crx- retina TTATGTGTAA (3) 1.9 0.0019 P10.5 crx+ retina CCTGTGGTTT (3) 11.5 0.0115 Adult retinal AGAGAATACC (2) 1.9 0.0019 Adult retinal TTCCTGCTGC (2) 1.9 0.0019 ONL TGGACACTTT (2) 5.7 0.0057