Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.347060	Rpl10a	ribosomal protein L10A	17		19896
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | structural constituent of ribosome
Human Homolog	RPL10A[ribosomal protein L10a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAAGCCCC (6) 215.3 0.2153 P8 Cb GC GGCAGCCCCC (5) 21.2 0.0212 P8 Cb GC AAACATTGGG (3) 4.9 0.0049 P8 Cb GC GGCAAGCCCA (3) 3.3 0.0033 P8 Cb GC GGCAGCCCAG (2) 3.3 0.0033 Cb medulloblastoma GGCAAGCCCC (6) 69.4 0.0694 Cb medulloblastoma AAACATTGGG (3) 6.9 0.0069 Cb medulloblastoma GGCAGCCCAG (2) 6.9 0.0069 Cb medulloblastoma GGCAGCCCCC (5) 6.9 0.0069 P8 GC+1d culture GGCAAGCCCC (6) 137 0.137 P8 GC+1d culture GGCAGCCCCC (5) 40 0.04 P8 GC+1d culture GGCAGCCCAG (2) 11.4 0.0114 P8 GC+1d culture AAACATTGGG (3) 4.6 0.0046 P8 GC+1d culture GGCAAGCCCA (3) 2.3 0.0023 P8 GC+1d culture GACATCGAGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GGCAAGCCCC (6) 196.7 0.1967 P8 GC+SHH+1d culture GGCAGCCCCC (5) 38.6 0.0386 P8 GC+SHH+1d culture GGCAGCCCAG (2) 12.9 0.0129 P8 GC+SHH+1d culture AAACATTGGG (3) 7 0.007 P8 GC+SHH+1d culture TTTTCATTGT (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCCAAAG (3) 1.2 0.0012 3T3 fibroblasts GGCAAGCCCC (6) 389.1 0.3891 3T3 fibroblasts GGCAGCCCCC (5) 105.1 0.1051 3T3 fibroblasts AAACATTGGG (3) 10.5 0.0105 3T3 fibroblasts GACATCGAGG (3) 3.5 0.0035 3T3 fibroblasts GGCAAGCCCA (3) 3.5 0.0035 3T3 fibroblasts GGGCAAGCCC (2) 3.5 0.0035 3T3 fibroblasts GTGGCCAAAG (3) 3.5 0.0035 E15 cortex GGCAAGCCCC (6) 183.1 0.1831 E15 cortex GGCAGCCCCC (5) 54.4 0.0544 E15 cortex GGCAAAGCCC (3) 9.9 0.0099 E15 cortex GGCAGCCCAG (2) 9.9 0.0099 E15 cortex GTGCTCTTGA (2) 9.9 0.0099 E15 cortex GACATCGAGG (3) 4.9 0.0049 E15 cortex GGCAAGCCCA (3) 4.9 0.0049 P1 cortex GGCAAGCCCC (6) 86.4 0.0864 P1 cortex GGCAGCCCCC (5) 18.2 0.0182 P1 cortex AAACATTGGG (3) 4.5 0.0045 P1 cortex GGCAGCCCAG (2) 4.5 0.0045 Hypothalamus GGCAAGCCCC (6) 103.2 0.1032 Hypothalamus GGCAGCCCAG (2) 9.1 0.0091 Hypothalamus AAACATTGGG (3) 1.8 0.0018 Hypothalamus GTGCTCTTGA (2) 1.8 0.0018 Hypothalamus TTTTCATTGT (6) 1.8 0.0018 E12.5 retina GGCAAGCCCC (6) 405.5 0.4055 E12.5 retina GGCAGCCCCC (5) 20.7 0.0207 E12.5 retina AAACATTGGG (3) 15 0.015 E12.5 retina GGCAGCCCAG (2) 3.8 0.0038 E12.5 retina TTTTCATTGT (6) 3.8 0.0038 E12.5 retina GACATCGAGG (3) 1.9 0.0019 E12.5 retina GGCAAGGCCC (8) 1.9 0.0019 E12.5 retina GGGCAAGCCC (2) 1.9 0.0019 E12.5 retina GTGCTCTTGA (2) 1.9 0.0019 E14.5 retina GGCAAGCCCC (6) 428.2 0.4282 E14.5 retina GGCAGCCCCC (5) 7.3 0.0073 E14.5 retina AAACATTGGG (3) 5.5 0.0055 E14.5 retina GACATCGAGG (3) 3.6 0.0036 E14.5 retina GGCAAAGCCC (3) 3.6 0.0036 E14.5 retina GTGCTCTTGA (2) 3.6 0.0036 E14.5 retina GTGGCCAAAG (3) 3.6 0.0036 E14.5 retina TTTTCATTGT (6) 3.6 0.0036 E14.5 retina GGCAAGCCCA (3) 1.8 0.0018 E14.5 retina GGCAGCCCAG (2) 1.8 0.0018 E14.5 retina GGGCAAGCCC (2) 1.8 0.0018 E16.5 retina GGCAAGCCCC (6) 594.1 0.5941 E16.5 retina GGCAGCCCCC (5) 9.1 0.0091 E16.5 retina GGCAGCCCAG (2) 5.4 0.0054 E16.5 retina TTTTCATTGT (6) 5.4 0.0054 E16.5 retina AAACATTGGG (3) 3.6 0.0036 E16.5 retina GGCAAAGCCC (3) 3.6 0.0036 E16.5 retina GTGCTCTTGA (2) 3.6 0.0036 E16.5 retina GACATCGAGG (3) 1.8 0.0018 E16.5 retina GGCTAGCCCC 1.8 0.0018 E18.5 retina GGCAAGCCCC (6) 372.9 0.3729 E18.5 retina GGCAGCCCCC (5) 27.3 0.0273 E18.5 retina GGCAGCCCAG (2) 7.3 0.0073 E18.5 retina AAACATTGGG (3) 3.6 0.0036 E18.5 retina GGCAAAGCCC (3) 3.6 0.0036 E18.5 retina GGCAAGGCCC (8) 3.6 0.0036 E18.5 retina GTGCTCTTGA (2) 1.8 0.0018 P0.5 retina GGCAAGCCCC (6) 237.5 0.2375 P0.5 retina GGCAGCCCCC (5) 21.6 0.0216 P0.5 retina GGCAGCCCAG (2) 5.9 0.0059 P0.5 retina AAACATTGGG (3) 2 0.002 P0.5 retina GGGCAAGCCC (2) 2 0.002 P2.5 retina GGCAAGCCCC (6) 256.9 0.2569 P2.5 retina GGCAGCCCCC (5) 26.4 0.0264 P2.5 retina GGCAGCCCAG (2) 8.8 0.0088 P2.5 retina AAACATTGGG (3) 5.3 0.0053 P2.5 retina GGGCAAGCCC (2) 3.5 0.0035 P2.5 retina GGCTAGCCCC 1.8 0.0018 P2.5 retina TTTTCATTGT (6) 1.8 0.0018 P4.5 retina GGCAAGCCCC (6) 328.9 0.3289 P4.5 retina GGCAGCCCCC (5) 15.9 0.0159 P4.5 retina GGCAGCCCAG (2) 7.9 0.0079 P4.5 retina GGCAAGGCCC (8) 5.9 0.0059 P4.5 retina GTGCTCTTGA (2) 4 0.004 P4.5 retina AAACATTGGG (3) 2 0.002 P4.5 retina GGCAAGCCCA (3) 2 0.002 P4.5 retina GTGGCCAAAG (3) 2 0.002 P6.5 retina GGCAAGCCCC (6) 275.1 0.2751 P6.5 retina GGCAGCCCCC (5) 16.7 0.0167 P6.5 retina GGCAGCCCAG (2) 13.3 0.0133 P6.5 retina GTGCTCTTGA (2) 6.7 0.0067 P6.5 retina AAACATTGGG (3) 5 0.005 P6.5 retina GGCAAAGCCC (3) 1.7 0.0017 P6.5 retina GGCAAGGCCC (8) 1.7 0.0017 P6.5 retina TTTTCATTGT (6) 1.7 0.0017 P10.5 crx- retina GGCAAGCCCC (6) 436.6 0.4366 P10.5 crx- retina GGCAGCCCCC (5) 24.2 0.0242 P10.5 crx- retina AAACATTGGG (3) 14.9 0.0149 P10.5 crx- retina GGCAAAGCCC (3) 5.6 0.0056 P10.5 crx- retina GGCAGCCCAG (2) 5.6 0.0056 P10.5 crx- retina GTGCTCTTGA (2) 5.6 0.0056 P10.5 crx- retina GTGGCCAAAG (3) 3.7 0.0037 P10.5 crx- retina GGCTAGCCCC 1.9 0.0019 P10.5 crx- retina GGGCAAGCCC (2) 1.9 0.0019 P10.5 crx- retina TTTTCATTGT (6) 1.9 0.0019 P10.5 crx+ retina GGCAAGCCCC (6) 344.1 0.3441 P10.5 crx+ retina GGCAGCCCCC (5) 15.4 0.0154 P10.5 crx+ retina GGCAGCCCAG (2) 11.5 0.0115 P10.5 crx+ retina GACATCGAGG (3) 3.8 0.0038 P10.5 crx+ retina GGCAAGGCCC (8) 3.8 0.0038 P10.5 crx+ retina GTGGCCAAAG (3) 3.8 0.0038 P10.5 crx+ retina GGGCAAGCCC (2) 1.9 0.0019 P10.5 crx+ retina GTGCTCTTGA (2) 1.9 0.0019 Adult retinal GGCAAGCCCC (6) 122.2 0.1222 Adult retinal GGCAGCCCCC (5) 7.4 0.0074 Adult retinal TTTTCATTGT (6) 3.7 0.0037 Adult retinal AAACATTGGG (3) 1.9 0.0019 Adult retinal GACATCGAGG (3) 1.9 0.0019 Adult retinal GGCAAGGCCC (8) 1.9 0.0019 Adult retinal GGCAGCCCAG (2) 1.9 0.0019 Adult retinal GGGCAAGCCC (2) 1.9 0.0019 Adult retinal GTGCTCTTGA (2) 1.9 0.0019 ONL GGCAAGCCCC (6) 122.6 0.1226 ONL AAACATTGGG (3) 9.6 0.0096 ONL GGCAGCCCCC (5) 9.6 0.0096 ONL GGCAGCCCAG (2) 7.7 0.0077 ONL GGCAAGGCCC (8) 1.9 0.0019