Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.347444	Hsf1	heat shock factor 1	15	15 43.0 cM	15499
Gene Ontology	cytoplasm | DNA binding | nucleus | pronucleus | protein folding | regulation of transcription, DNA-dependent | response to unfolded protein | spermatogenesis | transcription factor activity
Human Homolog	HSF1[heat shock transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGGTCCTA TGGCCCCGGG 6.6 0.0066 Cb medulloblastoma TGGCCCCGGG 11.6 0.0116 P8 GC+1d culture AGAGTCCCCT GCTGGTCCTA 4.5 0.0045 P8 GC+SHH+1d culture AGAGTCCCCT TGGCCCCGGG 3.5 0.0035 3T3 fibroblasts AGAGTCCCCT 3.5 0.0035 E15 cortex TGGCCCCGGG 14.8 0.0148 E12.5 retina AGAGTCCCCT TGGCCCCGGG 5.7 0.0057 E14.5 retina AGAGTCCCCT 5.5 0.0055 E16.5 retina AGAGTCCCCT GCTGGTCCTA TGGCCCCGGG 10.8 0.0108 E18.5 retina AGAGTCCCCT GCTGGTCCTA TGGCCCCGGG 12.7 0.0127 P0.5 retina AGAGTCCCCT GCTGGTCCTA TGGCCCCGGG 7.9 0.0079 P2.5 retina AGAGTCCCCT TGGCCCCGGG 8.8 0.0088 P4.5 retina AGAGTCCCCT TGGCCCCGGG 15.9 0.0159 P6.5 retina AGAGTCCCCT TGGCCCCGGG 8.4 0.0084 P10.5 crx- retina AGAGTCCCCT 3.7 0.0037 P10.5 crx+ retina TGGCCCCGGG 5.8 0.0058 Adult retinal AGAGTCCCCT TGGCCCCGGG 3.8 0.0038 ONL AGAGTCCCCT 9.6 0.0096