Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34766
1700105P06Rik
RIKEN cDNA 1700105P06 gene
19
68229
Human Homolog
LOC144097[hypothetical protein BC007540]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGCAGGAG
(
5
)
6.5
0.0065
P8 Cb GC
GTGTGTGGGG
(
5
)
1.6
0.0016
Cb medulloblastoma
GGAGCAGGAG
(
5
)
20.8
0.0208
Cb medulloblastoma
ATGGGGTTGG
(
3
)
2.3
0.0023
P8 GC+1d culture
GGAGCAGGAG
(
5
)
11.4
0.0114
P8 GC+1d culture
ATGGGGTTGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAGCAGGAG
(
5
)
10.5
0.0105
P8 GC+SHH+1d culture
ATGGGGTTGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GGAGCAGGAG
(
5
)
3.5
0.0035
E15 cortex
GGAGCAGGAG
(
5
)
19.8
0.0198
E15 cortex
ATGGGGTTGG
(
3
)
9.9
0.0099
P1 cortex
ATGGGGTTGG
(
3
)
27.3
0.0273
P1 cortex
GGAGCAGGAG
(
5
)
9.1
0.0091
P1 cortex
GTGTGTGGGG
(
5
)
4.5
0.0045
Hypothalamus
GGAGCAGGAG
(
5
)
14.5
0.0145
Hypothalamus
ATGGGGTTGG
(
3
)
12.7
0.0127
Hypothalamus
AATGGGGTTG
5.4
0.0054
E12.5 retina
GGAGCAGGAG
(
5
)
16.9
0.0169
E14.5 retina
GGAGCAGGAG
(
5
)
16.4
0.0164
E14.5 retina
ATGGGGTTGG
(
3
)
1.8
0.0018
E14.5 retina
CAACAGGACA (
2
)
1.8
0.0018
E14.5 retina
GTGTGTGGGG
(
5
)
1.8
0.0018
E16.5 retina
GGAGCAGGAG
(
5
)
5.4
0.0054
E16.5 retina
ATGGGGTTGG
(
3
)
1.8
0.0018
E16.5 retina
CAACAGGACA (
2
)
1.8
0.0018
E18.5 retina
GGAGCAGGAG
(
5
)
9.1
0.0091
P0.5 retina
GGAGCAGGAG
(
5
)
19.6
0.0196
P0.5 retina
ATGGGGTTGG
(
3
)
3.9
0.0039
P2.5 retina
GGAGCAGGAG
(
5
)
10.6
0.0106
P2.5 retina
ATGGGGTTGG
(
3
)
5.3
0.0053
P2.5 retina
CAACAGGACA (
2
)
1.8
0.0018
P2.5 retina
GTGTGTGGGG
(
5
)
1.8
0.0018
P4.5 retina
GGAGCAGGAG
(
5
)
17.8
0.0178
P4.5 retina
ATGGGGTTGG
(
3
)
2
0.002
P6.5 retina
GGAGCAGGAG
(
5
)
26.7
0.0267
P6.5 retina
ATGGGGTTGG
(
3
)
6.7
0.0067
P10.5 crx- retina
GGAGCAGGAG
(
5
)
20.4
0.0204
P10.5 crx- retina
ATGGGGTTGG
(
3
)
14.9
0.0149
P10.5 crx+ retina
GGAGCAGGAG
(
5
)
26.9
0.0269
P10.5 crx+ retina
ATGGGGTTGG
(
3
)
13.5
0.0135
Adult retinal
GGAGCAGGAG
(
5
)
37
0.037
Adult retinal
ATGGGGTTGG
(
3
)
24.1
0.0241
ONL
ATGGGGTTGG
(
3
)
9.6
0.0096
ONL
GGAGCAGGAG
(
5
)
9.6
0.0096
