Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34775	Pdha1	pyruvate dehydrogenase E1 alpha 1	X	X 66.5 cM	18597
Gene Ontology	extracellular space | glycolysis | metabolism | mitochondrion | oxidoreductase activity | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | pyruvate dehydrogenase (acetyl-transferring) activity | pyruvate dehydrogenase activity
Human Homolog	PDHA1[pyruvate dehydrogenase (lipoamide) alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGTGAAA (4) 11.4 0.0114 P8 Cb GC AAAACAAGCC (5) 8.2 0.0082 P8 Cb GC ACATTTCTGT (2) 6.5 0.0065 P8 Cb GC GAAAAAAATA (16) 1.6 0.0016 Cb medulloblastoma TGCTGTGAAA (4) 48.6 0.0486 Cb medulloblastoma AAAACAAGCC (5) 4.6 0.0046 Cb medulloblastoma ACATTTCTGT (2) 2.3 0.0023 P8 GC+1d culture TGCTGTGAAA (4) 24 0.024 P8 GC+1d culture AAAACAAGCC (5) 5.7 0.0057 P8 GC+1d culture ACATTTCTGT (2) 3.4 0.0034 P8 GC+1d culture TATGGAAAAT 1.1 0.0011 P8 GC+1d culture TCCTGATCAA (3) 1.1 0.0011 P8 GC+1d culture TGTTTTCAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCTGTGAAA (4) 26.9 0.0269 P8 GC+SHH+1d culture AAAACAAGCC (5) 3.5 0.0035 P8 GC+SHH+1d culture CAGTTTGTAA (4) 2.3 0.0023 P8 GC+SHH+1d culture CAGTTTGTAC (7) 2.3 0.0023 P8 GC+SHH+1d culture ACATTTCTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTTTTCAAA (3) 1.2 0.0012 3T3 fibroblasts ACATTTCTGT (2) 7 0.007 3T3 fibroblasts AAAACAAGCC (5) 3.5 0.0035 3T3 fibroblasts TGCTGTGAAA (4) 3.5 0.0035 E15 cortex TGCTGTGAAA (4) 9.9 0.0099 P1 cortex TGCTGTGAAA (4) 22.7 0.0227 P1 cortex ACATTTCTGT (2) 9.1 0.0091 Hypothalamus TGCTGTGAAA (4) 45.3 0.0453 Hypothalamus AAAACAAGCC (5) 12.7 0.0127 Hypothalamus ACATTTCTGT (2) 7.2 0.0072 Hypothalamus CAGTTTGTAC (7) 5.4 0.0054 E12.5 retina TGCTGTGAAA (4) 11.3 0.0113 E12.5 retina AAAACAAGCC (5) 3.8 0.0038 E14.5 retina TGCTGTGAAA (4) 16.4 0.0164 E14.5 retina AAAACAAGCC (5) 5.5 0.0055 E16.5 retina ACATTTCTGT (2) 7.2 0.0072 E16.5 retina TGCTGTGAAA (4) 5.4 0.0054 E16.5 retina CAGTTTGTAC (7) 1.8 0.0018 E16.5 retina GAAAAAAATA (16) 1.8 0.0018 E18.5 retina TGCTGTGAAA (4) 25.5 0.0255 E18.5 retina ACATTTCTGT (2) 3.6 0.0036 E18.5 retina AAAACAAGCC (5) 1.8 0.0018 E18.5 retina GAAAAAAATA (16) 1.8 0.0018 P0.5 retina TGCTGTGAAA (4) 9.8 0.0098 P0.5 retina AAAACAAGCC (5) 3.9 0.0039 P0.5 retina ACATTTCTGT (2) 3.9 0.0039 P2.5 retina TGCTGTGAAA (4) 7 0.007 P2.5 retina AAAACAAGCC (5) 3.5 0.0035 P4.5 retina TGCTGTGAAA (4) 17.8 0.0178 P4.5 retina TCCTGATCAA (3) 4 0.004 P4.5 retina AAAACAAGCC (5) 2 0.002 P4.5 retina ACATTTCTGT (2) 2 0.002 P4.5 retina TATGGAAAAT 2 0.002 P4.5 retina TGTTTTCAAA (3) 2 0.002 P6.5 retina TGCTGTGAAA (4) 8.3 0.0083 P6.5 retina ACATTTCTGT (2) 6.7 0.0067 P6.5 retina AAAACAAGCC (5) 5 0.005 P6.5 retina CAGTTTGTAC (7) 1.7 0.0017 P6.5 retina TATGGAAAAT 1.7 0.0017 P10.5 crx- retina TGCTGTGAAA (4) 18.6 0.0186 P10.5 crx- retina AAAACAAGCC (5) 9.3 0.0093 P10.5 crx- retina ACATTTCTGT (2) 5.6 0.0056 P10.5 crx- retina CAGTTTGTAC (7) 1.9 0.0019 P10.5 crx+ retina TGCTGTGAAA (4) 25 0.025 P10.5 crx+ retina AAAACAAGCC (5) 7.7 0.0077 P10.5 crx+ retina ACATTTCTGT (2) 5.8 0.0058 P10.5 crx+ retina CAGTTTGTAC (7) 3.8 0.0038 Adult retinal TGCTGTGAAA (4) 11.1 0.0111 Adult retinal AAAACAAGCC (5) 3.7 0.0037 Adult retinal ACATTTCTGT (2) 1.9 0.0019 Adult retinal CAGTTTGTAC (7) 1.9 0.0019 ONL TGCTGTGAAA (4) 9.6 0.0096 ONL AAAACAAGCC (5) 3.8 0.0038 ONL TGTTTTCAAA (3) 3.8 0.0038