Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.348018
9130401M01Rik
RIKEN cDNA 9130401M01 gene
15
75758
Human Homolog
FLJ14825[hypothetical protein FLJ14825]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAGTGGGGA
(
3
)
21.2
0.0212
P8 Cb GC
GAAAGCTCAA
(
4
)
4.9
0.0049
P8 Cb GC
CCTTCCCTTC (
3
)
1.6
0.0016
Cb medulloblastoma
ACAGTGGGGA
(
3
)
25.4
0.0254
Cb medulloblastoma
GAAAGCTCAA
(
4
)
13.9
0.0139
Cb medulloblastoma
CCTTCCCTTC (
3
)
4.6
0.0046
P8 GC+1d culture
ACAGTGGGGA
(
3
)
21.7
0.0217
P8 GC+1d culture
CCTTCCCTTC (
3
)
10.3
0.0103
P8 GC+1d culture
GAAAGCTCAA
(
4
)
3.4
0.0034
P8 GC+SHH+1d culture
ACAGTGGGGA
(
3
)
26.9
0.0269
P8 GC+SHH+1d culture
CCTTCCCTTC (
3
)
5.9
0.0059
P8 GC+SHH+1d culture
GAAAGCTCAA
(
4
)
5.9
0.0059
3T3 fibroblasts
ACAGTGGGGA
(
3
)
14
0.014
E15 cortex
ACAGTGGGGA
(
3
)
14.8
0.0148
E15 cortex
CCTTCCCTTC (
3
)
4.9
0.0049
P1 cortex
GGGGTCAGGG (
2
)
4.5
0.0045
Hypothalamus
GAAAGCTCAA
(
4
)
5.4
0.0054
Hypothalamus
CCTTCCCTTC (
3
)
3.6
0.0036
Hypothalamus
ACAGTGGGGA
(
3
)
1.8
0.0018
E12.5 retina
ACAGTGGGGA
(
3
)
35.7
0.0357
E12.5 retina
GAAAGCTCAA
(
4
)
7.5
0.0075
E12.5 retina
CCTTCCCTTC (
3
)
3.8
0.0038
E14.5 retina
ACAGTGGGGA
(
3
)
18.2
0.0182
E14.5 retina
CCTTCCCTTC (
3
)
3.6
0.0036
E14.5 retina
GAAAGCTCAA
(
4
)
3.6
0.0036
E16.5 retina
ACAGTGGGGA
(
3
)
18.1
0.0181
E16.5 retina
GAAAGCTCAA
(
4
)
7.2
0.0072
E16.5 retina
CCTTCCCTTC (
3
)
1.8
0.0018
E18.5 retina
ACAGTGGGGA
(
3
)
30.9
0.0309
E18.5 retina
GAAAGCTCAA
(
4
)
10.9
0.0109
E18.5 retina
CCTTCCCTTC (
3
)
3.6
0.0036
P0.5 retina
ACAGTGGGGA
(
3
)
15.7
0.0157
P0.5 retina
CCTTCCCTTC (
3
)
2
0.002
P0.5 retina
GGGGTCAGGG (
2
)
2
0.002
P2.5 retina
ACAGTGGGGA
(
3
)
33.4
0.0334
P2.5 retina
CCTTCCCTTC (
3
)
12.3
0.0123
P2.5 retina
GAAAGCTCAA
(
4
)
5.3
0.0053
P2.5 retina
GGGGTCAGGG (
2
)
5.3
0.0053
P4.5 retina
ACAGTGGGGA
(
3
)
13.9
0.0139
P4.5 retina
CCTTCCCTTC (
3
)
5.9
0.0059
P6.5 retina
ACAGTGGGGA
(
3
)
16.7
0.0167
P6.5 retina
CCTTCCCTTC (
3
)
1.7
0.0017
P6.5 retina
GAAAGCTCAA
(
4
)
1.7
0.0017
P10.5 crx- retina
ACAGTGGGGA
(
3
)
18.6
0.0186
P10.5 crx- retina
GAAAGCTCAA
(
4
)
9.3
0.0093
P10.5 crx- retina
CCTTCCCTTC (
3
)
3.7
0.0037
P10.5 crx- retina
GGGGTCAGGG (
2
)
3.7
0.0037
P10.5 crx+ retina
ACAGTGGGGA
(
3
)
23.1
0.0231
P10.5 crx+ retina
CCTTCCCTTC (
3
)
7.7
0.0077
P10.5 crx+ retina
GAAAGCTCAA
(
4
)
7.7
0.0077
P10.5 crx+ retina
GGGGTCAGGG (
2
)
1.9
0.0019
Adult retinal
ACAGTGGGGA
(
3
)
9.3
0.0093
Adult retinal
GAAAGCTCAA
(
4
)
3.7
0.0037
Adult retinal
CCTTCCCTTC (
3
)
1.9
0.0019
ONL
ACAGTGGGGA
(
3
)
9.6
0.0096
ONL
GAAAGCTCAA
(
4
)
5.7
0.0057
