Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.349430	Trpm4	transient receptor potential cation channel, subfamily M, member 4	7		68667
Gene Ontology	calcium activated cation channel activity | calcium channel activity | calcium ion transport | cation channel activity | cation transport | integral to membrane | integral to membrane | ion channel activity | ion transport | membrane | plasma membrane | receptor activity | regulation of membrane potential | transport | voltage-gated ion channel activity
Human Homolog	TRPM4[transient receptor potential cation channel, subfamily M, member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGCAAAGA (5) 26.1 0.0261 P8 Cb GC CAGCTCACTG (2) 6.5 0.0065 P8 Cb GC CTGGAAAGCT (4) 3.3 0.0033 P8 Cb GC AAGGCTCCTG (3) 1.6 0.0016 Cb medulloblastoma AAGGCAAAGA (5) 16.2 0.0162 Cb medulloblastoma GCCAGAAGGC (4) 4.6 0.0046 P8 GC+1d culture AAGGCAAAGA (5) 11.4 0.0114 P8 GC+1d culture AAGGCTCCTG (3) 3.4 0.0034 P8 GC+SHH+1d culture AAGGCAAAGA (5) 24.6 0.0246 P8 GC+SHH+1d culture ACCTTGAAAC (6) 2.3 0.0023 P8 GC+SHH+1d culture AAGGCTCCTG (3) 1.2 0.0012 P8 GC+SHH+1d culture CAGCTCACTG (2) 1.2 0.0012 3T3 fibroblasts AAGGCAAAGA (5) 31.5 0.0315 3T3 fibroblasts ACCTTGAAAC (6) 3.5 0.0035 3T3 fibroblasts CAGCTCACTG (2) 3.5 0.0035 E15 cortex AAGGCAAAGA (5) 24.7 0.0247 E15 cortex CAGCTCACTG (2) 4.9 0.0049 E15 cortex CTGGAAAGCT (4) 4.9 0.0049 P1 cortex AAGGCAAAGA (5) 36.4 0.0364 P1 cortex AAGGCTCCTG (3) 9.1 0.0091 Hypothalamus AAGGCAAAGA (5) 27.2 0.0272 Hypothalamus GCCAGAAGGC (4) 7.2 0.0072 Hypothalamus ACCTTGAAAC (6) 3.6 0.0036 Hypothalamus AGGAACAGAA (6) 3.6 0.0036 Hypothalamus CAGCTCACTG (2) 1.8 0.0018 E12.5 retina AAGGCAAAGA (5) 31.9 0.0319 E12.5 retina ACCTTGAAAC (6) 3.8 0.0038 E12.5 retina AGGAACAGAA (6) 1.9 0.0019 E12.5 retina CTGGAAAGCT (4) 1.9 0.0019 E14.5 retina AAGGCAAAGA (5) 7.3 0.0073 E14.5 retina GCCAGAAGGC (4) 3.6 0.0036 E14.5 retina ACCTTGAAAC (6) 1.8 0.0018 E16.5 retina ACCTTGAAAC (6) 10.9 0.0109 E16.5 retina AAGGCAAAGA (5) 7.2 0.0072 E16.5 retina CAGCTCACTG (2) 1.8 0.0018 E16.5 retina CTGGAAAGCT (4) 1.8 0.0018 E16.5 retina GCCAGAAGGC (4) 1.8 0.0018 E18.5 retina AAGGCAAAGA (5) 10.9 0.0109 E18.5 retina CAGCTCACTG (2) 3.6 0.0036 E18.5 retina ACCTTGAAAC (6) 1.8 0.0018 P0.5 retina AAGGCAAAGA (5) 41.2 0.0412 P0.5 retina ACCTTGAAAC (6) 2 0.002 P2.5 retina AAGGCAAAGA (5) 14.1 0.0141 P2.5 retina GCCAGAAGGC (4) 1.8 0.0018 P4.5 retina AAGGCAAAGA (5) 11.9 0.0119 P6.5 retina AAGGCAAAGA (5) 5 0.005 P6.5 retina AAGGCTCCTG (3) 1.7 0.0017 P6.5 retina CAGCTCACTG (2) 1.7 0.0017 P10.5 crx- retina AAGGCAAAGA (5) 26 0.026 P10.5 crx- retina AAGGCTCCTG (3) 1.9 0.0019 P10.5 crx+ retina AAGGCAAAGA (5) 3.8 0.0038 P10.5 crx+ retina CTGGAAAGCT (4) 1.9 0.0019 Adult retinal AAGGCAAAGA (5) 13 0.013 Adult retinal AAGGCTCCTG (3) 1.9 0.0019 Adult retinal CAGCTCACTG (2) 1.9 0.0019 ONL AAGGCAAAGA (5) 34.5 0.0345 ONL AAGGCTCCTG (3) 1.9 0.0019