Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35116
AI194318
expressed sequence AI194318
2
241576
Mm.35116
1700082C01Rik
RIKEN cDNA 1700082C01 gene
2
73479
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
TGGCTGCTGG (
16
)
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
GGGTTTTTTC
(
6
)
2.3
0.0023
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
TGGCTGCTGG (
16
)
1.1
0.0011
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
GGCTCCCCAG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCTGCTGG (
16
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
TGGCTGCTGG (
16
)
3.5
0.0035
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
TGGCTGCTGG (
16
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
CTTAAAAAGA (
4
)
4.5
0.0045
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
TGGCTGCTGG (
16
)
3.6
0.0036
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
CTTAAAAAGA (
4
)
1.9
0.0019
E12.5 retina
TGGCTGCTGG (
16
)
1.9
0.0019
E14.5 retina
TGGCTGCTGG (
16
)
23.7
0.0237
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
TGGCTGCTGG (
16
)
7.2
0.0072
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
GGCTCCCCAG
(
4
)
1.8
0.0018
E18.5 retina
TGGCTGCTGG (
16
)
1.8
0.0018
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
GGCTCCCCAG
(
4
)
2
0.002
P0.5 retina
GGGTTTTTTC
(
6
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
TGGCTGCTGG (
16
)
8.8
0.0088
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
TGGCTGCTGG (
16
)
2
0.002
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
TGGCTGCTGG (
16
)
3.3
0.0033
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
TGGCTGCTGG (
16
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
GGCTCCCCAG
(
4
)
1.9
0.0019
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
TGGCTGCTGG (
16
)
5.6
0.0056
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
TGGCTGCTGG (
16
)
5.7
0.0057
ONL
GGGTTTTTTC
(
6
)
1.9
0.0019
