Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35168
Tdrd3
tudor domain containing 3
14
219249
Gene Ontology
nucleic acid binding
Human Homolog
TDRD3[tudor domain containing 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAGAAGAA
(
7
)
4.9
0.0049
P8 Cb GC
CCTCTGGTCT (
3
)
1.6
0.0016
Cb medulloblastoma
CCTCTGGTCT (
3
)
6.9
0.0069
Cb medulloblastoma
GGAAGAAGAA
(
7
)
6.9
0.0069
Cb medulloblastoma
AAAAAAAAAT (
25
)
4.6
0.0046
Cb medulloblastoma
TTCTGATTTT
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAT (
25
)
3.4
0.0034
P8 GC+1d culture
GGAAGAAGAA
(
7
)
3.4
0.0034
P8 GC+1d culture
CCTCTGGTCT (
3
)
2.3
0.0023
P8 GC+1d culture
TTCTGATTTT
1.1
0.0011
P8 GC+SHH+1d culture
CCTCTGGTCT (
3
)
7
0.007
P8 GC+SHH+1d culture
GGAAGAAGAA
(
7
)
7
0.007
P8 GC+SHH+1d culture
AAAAAAAAAT (
25
)
5.9
0.0059
P8 GC+SHH+1d culture
TTCTGATTTT
2.3
0.0023
P8 GC+SHH+1d culture
AAATATTAAG (
2
)
1.2
0.0012
P1 cortex
AAAAAAAAAT (
25
)
9.1
0.0091
Hypothalamus
GGAAGAAGAA
(
7
)
3.6
0.0036
Hypothalamus
AAATATTAAG (
2
)
1.8
0.0018
E12.5 retina
GGAAGAAGAA
(
7
)
3.8
0.0038
E14.5 retina
AAAAAAAAAT (
25
)
5.5
0.0055
E14.5 retina
AAATATTAAG (
2
)
1.8
0.0018
E14.5 retina
GGAAGAAGAA
(
7
)
1.8
0.0018
E16.5 retina
GGAAGAAGAA
(
7
)
7.2
0.0072
E16.5 retina
AAAAAAAAAT (
25
)
1.8
0.0018
E16.5 retina
AAATATTAAG (
2
)
1.8
0.0018
E16.5 retina
CCTCTGGTCT (
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAT (
25
)
7.3
0.0073
E18.5 retina
GGAAGAAGAA
(
7
)
7.3
0.0073
P0.5 retina
AAAAAAAAAT (
25
)
3.9
0.0039
P0.5 retina
GGAAGAAGAA
(
7
)
2
0.002
P2.5 retina
GGAAGAAGAA
(
7
)
7
0.007
P2.5 retina
AAAAAAAAAT (
25
)
3.5
0.0035
P2.5 retina
TTCTGATTTT
1.8
0.0018
P4.5 retina
GGAAGAAGAA
(
7
)
9.9
0.0099
P4.5 retina
AAAAAAAAAT (
25
)
4
0.004
P6.5 retina
GGAAGAAGAA
(
7
)
8.3
0.0083
P10.5 crx- retina
TGTCTTACAA
(
2
)
5.6
0.0056
P10.5 crx- retina
AAAAAAAAAT (
25
)
3.7
0.0037
P10.5 crx- retina
GGAAGAAGAA
(
7
)
3.7
0.0037
P10.5 crx+ retina
CCTCTGGTCT (
3
)
3.8
0.0038
P10.5 crx+ retina
GGAAGAAGAA
(
7
)
1.9
0.0019
P10.5 crx+ retina
TGTCTTACAA
(
2
)
1.9
0.0019
Adult retinal
TGTCTTACAA
(
2
)
9.3
0.0093
Adult retinal
AAAAAAAAAT (
25
)
1.9
0.0019
ONL
TGTCTTACAA
(
2
)
5.7
0.0057
ONL
AAAAAAAAAT (
25
)
1.9
0.0019
ONL
GGAAGAAGAA
(
7
)
1.9
0.0019
