Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.352859	Sf3b4	splicing factor 3b, subunit 4	15		107701
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | RNA binding | spliceosome complex
Human Homolog	SF3B4[splicing factor 3b, subunit 4, 49kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 22.9 0.0229 Cb medulloblastoma TATAGAAAAA (2) TTAAAAAAAA (2) 64.8 0.0648 P8 GC+1d culture GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 37.6 0.0376 P8 GC+SHH+1d culture GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 42.2 0.0422 3T3 fibroblasts GATACACGGG 3.5 0.0035 E15 cortex GCCCCCCAGC (2) TTAAAAAAAA (2) 14.8 0.0148 P1 cortex TATAGAAAAA (2) TTAAAAAAAA (2) 18.1 0.0181 Hypothalamus TTAAAAAAAA (2) 19.9 0.0199 E12.5 retina TATAGAAAAA (2) TTAAAAAAAA (2) 33.8 0.0338 E14.5 retina GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 27.3 0.0273 E16.5 retina GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 27.1 0.0271 E18.5 retina TATAGAAAAA (2) TTAAAAAAAA (2) 69.1 0.0691 P0.5 retina GCCCCCCAGC (2) TATAGAAAAA (2) TTAAAAAAAA (2) 27.6 0.0276 P2.5 retina TATAGAAAAA (2) TTAAAAAAAA (2) 47.5 0.0475 P4.5 retina GATACACGGG TATAGAAAAA (2) TTAAAAAAAA (2) 65.5 0.0655 P6.5 retina TATAGAAAAA (2) TTAAAAAAAA (2) 23.4 0.0234 P10.5 crx- retina TATAGAAAAA (2) TTAAAAAAAA (2) 14.9 0.0149 P10.5 crx+ retina TATAGAAAAA (2) TTAAAAAAAA (2) 7.7 0.0077 Adult retinal GATACACGGG TTAAAAAAAA (2) 9.3 0.0093 ONL TATAGAAAAA (2) TTAAAAAAAA (2) 17.3 0.0173