Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.353	Atp5j	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F	16	9 4.0 cM	11957
Gene Ontology	ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | mitochondrion | mitochondrion | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP5J[ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AATTAGTTGT 50.6 0.0506 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AATTAGTTGT 30.1 0.0301 Cb medulloblastoma CATTTCACAG (9) 4.6 0.0046 Cb medulloblastoma GATTTTGTAT (2) 2.3 0.0023 Cb medulloblastoma GTTCTGCACA (5) 2.3 0.0023 Cb medulloblastoma GTTCTGCAGA (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AATTAGTTGT 28.5 0.0285 P8 GC+1d culture GTTCTGCACA (5) 2.3 0.0023 P8 GC+1d culture GATTTTGTAT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AATTAGTTGT 32.8 0.0328 P8 GC+SHH+1d culture AATTAATTGT 1.2 0.0012 P8 GC+SHH+1d culture TGGTGGTTTG (7) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AATTAGTTGT 50 0.05 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AATTAGTTGT 59.8 0.0598 Hypothalamus GATTTTGTAT (2) 7.2 0.0072 Hypothalamus GTTCTGCAGA (3) 3.6 0.0036 Hypothalamus CATTTCACAG (9) 1.8 0.0018 Hypothalamus GATTTGGTAT (2) 1.8 0.0018 Hypothalamus GCTGAGTCTC 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AATTAGTTGT 50.7 0.0507 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AATTAGTTGT 52.8 0.0528 E14.5 retina GATTTGGTAT (2) 3.6 0.0036 E14.5 retina TGGTGGTTTG (7) 1.8 0.0018 E16.5 retina AATTAGTTGT 67 0.067 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GCTGAGTCTC 7.2 0.0072 E16.5 retina GATTTTGTAT (2) 3.6 0.0036 E16.5 retina GTTCTGCAGA (3) 3.6 0.0036 E16.5 retina TGGTGGTTTG (7) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AATTAGTTGT 47.3 0.0473 E18.5 retina GCTGAGTCTC 1.8 0.0018 E18.5 retina TGGTGGTTTG (7) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AATTAGTTGT 21.6 0.0216 P0.5 retina TGGTGGTTTG (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AATTAGTTGT 28.2 0.0282 P2.5 retina GATTTTGTAT (2) 1.8 0.0018 P2.5 retina TGGTGGTTTG (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AATTAGTTGT 41.6 0.0416 P4.5 retina AATTAATTGT 2 0.002 P4.5 retina GTTCTGCACA (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AATTAGTTGT 40 0.04 P10.5 crx- retina AATTAGTTGT 92.9 0.0929 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CATTTCACAG (9) 3.7 0.0037 P10.5 crx- retina GATTTTGTAT (2) 3.7 0.0037 P10.5 crx- retina GCTGAGTCTC 1.9 0.0019 P10.5 crx- retina GTTCTGCACA (5) 1.9 0.0019 P10.5 crx- retina GTTCTGCAGA (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AATTAGTTGT 23.1 0.0231 P10.5 crx+ retina GTTCTGCACA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AATTAGTTGT 16.7 0.0167 Adult retinal TGGTGGTTTG (7) 3.7 0.0037 Adult retinal AATTAATTGT 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AATTAGTTGT 32.6 0.0326 ONL GTTCTGCAGA (3) 1.9 0.0019