Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35511	Lass4	longevity assurance homolog 4 (S. cerevisiae)	8		67260
Gene Ontology	ceramide biosynthesis | DNA binding | endoplasmic reticulum | integral to membrane | lipid biosynthesis | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	LASS4[LAG1 longevity assurance homolog 4 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GGCAGAGCTG (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GGTGGGGGGC (7) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAGAATGAG (2) 3.4 0.0034 P8 GC+1d culture GTTTGTTTTG (8) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAGAATGAG (2) 2.3 0.0023 P8 GC+SHH+1d culture ATAGCTGCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture CCTGACCAAT (6) 1.2 0.0012 P8 GC+SHH+1d culture CTGAGGCAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GGTGGGGGGC (7) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GGCAGAGCTG (5) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAGAATGAG (2) 3.6 0.0036 Hypothalamus CTGAGGCAGG (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GTTTGTTTTG (8) 7.5 0.0075 E12.5 retina ATAGCTGCAG (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATAGCTGCAG (3) 1.8 0.0018 E14.5 retina CTGAGGCAGG (4) 1.8 0.0018 E14.5 retina GAAGAATGAG (2) 1.8 0.0018 E14.5 retina GATCCTCTGG (2) 1.8 0.0018 E14.5 retina GGCCAGGTAT (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GATCCTCTGG (2) 3.6 0.0036 E16.5 retina GTTTGTTTTG (8) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GATCCTCTGG (2) 1.8 0.0018 E18.5 retina GGCCAGGTAT (3) 1.8 0.0018 E18.5 retina TGTGTCAAGG (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTTTGTTTTG (8) 3.9 0.0039 P0.5 retina CTGAGGCAGG (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina ATAGCTGCAG (3) 7 0.007 P2.5 retina GGCAGAGCTG (5) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATAGCTGCAG (3) 5.9 0.0059 P4.5 retina GAAGAATGAG (2) 2 0.002 P4.5 retina GGTGGGGGGC (7) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATAGCTGCAG (3) 6.7 0.0067 P6.5 retina CTGAGGCAGG (4) 3.3 0.0033 P6.5 retina GAAGAATGAG (2) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTGACCAAT (6) 3.7 0.0037 P10.5 crx- retina ATAGCTGCAG (3) 1.9 0.0019 P10.5 crx- retina GTTTGTTTTG (8) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTGACCAAT (6) 1.9 0.0019 P10.5 crx+ retina GATCCTCTGG (2) 1.9 0.0019 P10.5 crx+ retina GGCAGAGCTG (5) 1.9 0.0019 P10.5 crx+ retina GGCCAGGTAT (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCTGACCAAT (6) 1.9 0.0019 Adult retinal CTGAGGCAGG (4) 1.9 0.0019 Adult retinal GAAGAATGAG (2) 1.9 0.0019 Adult retinal TGTGTCAAGG (5) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAGAATGAG (2) 9.6 0.0096 ONL ATAGCTGCAG (3) 3.8 0.0038 ONL TGTGTCAAGG (5) 3.8 0.0038