Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35546
2700085M18Rik
RIKEN cDNA 2700085M18 gene
8
78833
Human Homolog
FLJ13912[hypothetical protein FLJ13912]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTAATGTA (
6
)
230
0.23
P8 Cb GC
TACTTGTGTT (
6
)
14.7
0.0147
P8 Cb GC
AAGACACTTC
(
5
)
6.5
0.0065
P8 Cb GC
CATTAAAATG
(
3
)
1.6
0.0016
Cb medulloblastoma
GCCTAATGTA (
6
)
64.7
0.0647
Cb medulloblastoma
TACTTGTGTT (
6
)
55.5
0.0555
Cb medulloblastoma
CATTAAAAAA
(
3
)
2.3
0.0023
P8 GC+1d culture
GCCTAATGTA (
6
)
223.7
0.2237
P8 GC+1d culture
TACTTGTGTT (
6
)
18.3
0.0183
P8 GC+1d culture
TTTAAAGAGA (
3
)
3.4
0.0034
P8 GC+1d culture
AAGACACTTC
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCTAATGTA (
6
)
207.3
0.2073
P8 GC+SHH+1d culture
TACTTGTGTT (
6
)
9.4
0.0094
P8 GC+SHH+1d culture
AAGACACTTC
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TTTAAAGAGA (
3
)
1.2
0.0012
3T3 fibroblasts
GCCTAATGTA (
6
)
73.6
0.0736
3T3 fibroblasts
TACTTGTGTT (
6
)
7
0.007
E15 cortex
GCCTAATGTA (
6
)
9.9
0.0099
E15 cortex
TACTTGTGTT (
6
)
4.9
0.0049
P1 cortex
GCCTAATGTA (
6
)
72.7
0.0727
P1 cortex
AAGACACTTC
(
5
)
4.5
0.0045
P1 cortex
TACTTGTGTT (
6
)
4.5
0.0045
P1 cortex
TTTAAAGAGA (
3
)
4.5
0.0045
Hypothalamus
GCCTAATGTA (
6
)
222.8
0.2228
Hypothalamus
TACTTGTGTT (
6
)
38
0.038
Hypothalamus
CATTAAAAAA
(
3
)
1.8
0.0018
Hypothalamus
CATTAAAATG
(
3
)
1.8
0.0018
Hypothalamus
CTGGGTGACA (
4
)
1.8
0.0018
E12.5 retina
GCCTAATGTA (
6
)
403.6
0.4036
E12.5 retina
TACTTGTGTT (
6
)
5.6
0.0056
E12.5 retina
CATTAAAATG
(
3
)
1.9
0.0019
E14.5 retina
GCCTAATGTA (
6
)
300.6
0.3006
E14.5 retina
AAGACACTTC
(
5
)
9.1
0.0091
E14.5 retina
CATTAAAATG
(
3
)
1.8
0.0018
E16.5 retina
GCCTAATGTA (
6
)
264.4
0.2644
E16.5 retina
AAGACACTTC
(
5
)
7.2
0.0072
E16.5 retina
TACTTGTGTT (
6
)
7.2
0.0072
E16.5 retina
CATTAAAATG
(
3
)
1.8
0.0018
E18.5 retina
GCCTAATGTA (
6
)
281.9
0.2819
E18.5 retina
TACTTGTGTT (
6
)
12.7
0.0127
E18.5 retina
AAGACACTTC
(
5
)
9.1
0.0091
P0.5 retina
GCCTAATGTA (
6
)
155
0.155
P0.5 retina
TACTTGTGTT (
6
)
9.8
0.0098
P0.5 retina
CATTAAAAAA
(
3
)
3.9
0.0039
P2.5 retina
GCCTAATGTA (
6
)
248.1
0.2481
P2.5 retina
TACTTGTGTT (
6
)
12.3
0.0123
P2.5 retina
AAGACACTTC
(
5
)
3.5
0.0035
P2.5 retina
CATTAAAATG
(
3
)
1.8
0.0018
P2.5 retina
TTTAAAGAGA (
3
)
1.8
0.0018
P4.5 retina
GCCTAATGTA (
6
)
255.6
0.2556
P4.5 retina
TACTTGTGTT (
6
)
11.9
0.0119
P4.5 retina
AAGACACTTC
(
5
)
4
0.004
P6.5 retina
GCCTAATGTA (
6
)
176.7
0.1767
P6.5 retina
TACTTGTGTT (
6
)
15
0.015
P6.5 retina
TTTAAAGAGA (
3
)
8.3
0.0083
P6.5 retina
AAGACACTTC
(
5
)
1.7
0.0017
P10.5 crx- retina
GCCTAATGTA (
6
)
109.6
0.1096
P10.5 crx- retina
TACTTGTGTT (
6
)
27.9
0.0279
P10.5 crx- retina
AAGACACTTC
(
5
)
1.9
0.0019
P10.5 crx- retina
TTTAAAGAGA (
3
)
1.9
0.0019
P10.5 crx+ retina
GCCTAATGTA (
6
)
146.1
0.1461
P10.5 crx+ retina
TACTTGTGTT (
6
)
25
0.025
P10.5 crx+ retina
AAGACACTTC
(
5
)
5.8
0.0058
P10.5 crx+ retina
CTGGGTGACA (
4
)
1.9
0.0019
Adult retinal
GCCTAATGTA (
6
)
85.2
0.0852
Adult retinal
TACTTGTGTT (
6
)
24.1
0.0241
Adult retinal
AAGACACTTC
(
5
)
1.9
0.0019
Adult retinal
CTGGGTGACA (
4
)
1.9
0.0019
Adult retinal
TTTAAAGAGA (
3
)
1.9
0.0019
ONL
GCCTAATGTA (
6
)
63.2
0.0632
ONL
TACTTGTGTT (
6
)
19.2
0.0192
ONL
TTTAAAGAGA (
3
)
5.7
0.0057
ONL
CATTAAAAAA
(
3
)
1.9
0.0019
ONL
CTGGGTGACA (
4
)
1.9
0.0019
