Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.355625
6330544N02Rik
RIKEN cDNA 6330544N02 gene
3
76160
Mm.355625
4921509J17Rik
RIKEN cDNA 4921509J17 gene
3
70857
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCTGTGATGT (
3
)
21.2
0.0212
P8 Cb GC
GAACTTGTTC (
4
)
1.6
0.0016
P8 Cb GC
TCTGTTGTGT (
4
)
1.6
0.0016
Cb medulloblastoma
TAATAATAAT
(
3
)
2.3
0.0023
Cb medulloblastoma
TCTGTGATGT (
3
)
2.3
0.0023
Cb medulloblastoma
TTGAAAATTG
(
5
)
2.3
0.0023
P8 GC+1d culture
TCTGTGATGT (
3
)
13.7
0.0137
P8 GC+SHH+1d culture
TCTGTGATGT (
3
)
7
0.007
3T3 fibroblasts
TCTGTGATGT (
3
)
7
0.007
3T3 fibroblasts
GAACTTGTTC (
4
)
3.5
0.0035
E15 cortex
TCTGTGATGT (
3
)
4.9
0.0049
P1 cortex
TCTGTGATGT (
3
)
13.6
0.0136
P1 cortex
TAATAATAAT
(
3
)
4.5
0.0045
P1 cortex
TCTGTTGTGT (
4
)
4.5
0.0045
Hypothalamus
TCTGTGATGT (
3
)
10.9
0.0109
Hypothalamus
TAATAATAAT
(
3
)
3.6
0.0036
Hypothalamus
TCTGTTGTGT (
4
)
1.8
0.0018
Hypothalamus
TTGAAAATTG
(
5
)
1.8
0.0018
E12.5 retina
TCTGTGATGT (
3
)
15
0.015
E14.5 retina
TCTGTGATGT (
3
)
7.3
0.0073
E14.5 retina
TAATAATAAT
(
3
)
3.6
0.0036
E16.5 retina
TCTGTGATGT (
3
)
14.5
0.0145
E18.5 retina
TCTGTGATGT (
3
)
10.9
0.0109
E18.5 retina
GAACTTGTTC (
4
)
1.8
0.0018
E18.5 retina
TAATAATAAT
(
3
)
1.8
0.0018
P0.5 retina
TCTGTGATGT (
3
)
9.8
0.0098
P0.5 retina
TCTGTTGTGT (
4
)
3.9
0.0039
P2.5 retina
TCTGTGATGT (
3
)
8.8
0.0088
P4.5 retina
TAATAATAAT
(
3
)
2
0.002
P4.5 retina
TCTGTGATGT (
3
)
2
0.002
P4.5 retina
TTGAAAATTG
(
5
)
2
0.002
P6.5 retina
TCTGTGATGT (
3
)
20
0.02
P6.5 retina
TAATAATAAT
(
3
)
3.3
0.0033
P10.5 crx- retina
TCTGTGATGT (
3
)
61.3
0.0613
P10.5 crx- retina
TAATAATAAT
(
3
)
1.9
0.0019
P10.5 crx- retina
TTGAAAATTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
TCTGTGATGT (
3
)
21.1
0.0211
Adult retinal
TCTGTGATGT (
3
)
14.8
0.0148
ONL
TCTGTGATGT (
3
)
5.7
0.0057
ONL
TAATAATAAT
(
3
)
3.8
0.0038
ONL
TTGAAAATTG
(
5
)
3.8
0.0038
