Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35605
AL118183
expressed sequence AL118183
8
404562
Mm.35605
Cdh1
cadherin 1
8
8 53.3 cM
12550
Mm.35605
W91776
expressed sequence W91776
8
97503
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATGATTCT (
5
)
13.1
0.0131
P8 Cb GC
GGAAAAAAAA (
69
)
8.2
0.0082
P8 Cb GC
TTCCTGAATT (
8
)
4.9
0.0049
P8 Cb GC
CAGTTTGCCA (
4
)
3.3
0.0033
P8 Cb GC
TACGGCGGTG (
6
)
3.3
0.0033
P8 Cb GC
GGCAAAAAAG (
10
)
1.6
0.0016
Cb medulloblastoma
GGAAAAAAAA (
69
)
41.6
0.0416
Cb medulloblastoma
TAATGATTCT (
5
)
6.9
0.0069
P8 GC+1d culture
GGAAAAAAAA (
69
)
5.7
0.0057
P8 GC+1d culture
TACGGCGGTG (
6
)
4.6
0.0046
P8 GC+1d culture
TTTCCAGCGT (
6
)
3.4
0.0034
P8 GC+1d culture
TAATGATTCT (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAAAAAAA (
69
)
7
0.007
P8 GC+SHH+1d culture
TAATGATTCT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TTTCCAGCGT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGCAAAAAAG (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGCTGGTTG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTTATTTCC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TACGGCGGTG (
6
)
1.2
0.0012
3T3 fibroblasts
TACGGCGGTG (
6
)
3.5
0.0035
E15 cortex
GGAAAAAAAA (
69
)
9.9
0.0099
P1 cortex
GGAAAAAAAA (
69
)
4.5
0.0045
P1 cortex
GTGCTGGTTG (
6
)
4.5
0.0045
Hypothalamus
GGAAAAAAAA (
69
)
14.5
0.0145
Hypothalamus
TAATGATTCT (
5
)
5.4
0.0054
Hypothalamus
TTTCCAGCGT (
6
)
1.8
0.0018
E12.5 retina
TAATGATTCT (
5
)
7.5
0.0075
E12.5 retina
TTTCCAGCGT (
6
)
3.8
0.0038
E12.5 retina
GGAAAAAAAA (
69
)
1.9
0.0019
E14.5 retina
GGAAAAAAAA (
69
)
10.9
0.0109
E14.5 retina
TAATGATTCT (
5
)
10.9
0.0109
E14.5 retina
TTCCTGAATT (
8
)
1.8
0.0018
E14.5 retina
TTTCCAGCGT (
6
)
1.8
0.0018
E16.5 retina
TAATGATTCT (
5
)
9.1
0.0091
E16.5 retina
GGAAAAAAAA (
69
)
1.8
0.0018
E16.5 retina
TTCCTGAATT (
8
)
1.8
0.0018
E16.5 retina
TTTCCAGCGT (
6
)
1.8
0.0018
E18.5 retina
GGAAAAAAAA (
69
)
16.4
0.0164
E18.5 retina
TAATGATTCT (
5
)
5.5
0.0055
E18.5 retina
TACGGCGGTG (
6
)
1.8
0.0018
E18.5 retina
TTTCCAGCGT (
6
)
1.8
0.0018
P0.5 retina
GGAAAAAAAA (
69
)
13.7
0.0137
P0.5 retina
TACGGCGGTG (
6
)
9.8
0.0098
P0.5 retina
TAATGATTCT (
5
)
5.9
0.0059
P0.5 retina
TTTCCAGCGT (
6
)
2
0.002
P2.5 retina
GGAAAAAAAA (
69
)
7
0.007
P2.5 retina
TAATGATTCT (
5
)
5.3
0.0053
P2.5 retina
CAGTTTGCCA (
4
)
1.8
0.0018
P4.5 retina
GGAAAAAAAA (
69
)
13.9
0.0139
P4.5 retina
TAATGATTCT (
5
)
2
0.002
P4.5 retina
TTCCTGAATT (
8
)
2
0.002
P6.5 retina
GGAAAAAAAA (
69
)
13.3
0.0133
P6.5 retina
TACGGCGGTG (
6
)
3.3
0.0033
P6.5 retina
TAATGATTCT (
5
)
1.7
0.0017
P6.5 retina
TTCCTGAATT (
8
)
1.7
0.0017
P10.5 crx- retina
TAATGATTCT (
5
)
11.1
0.0111
P10.5 crx- retina
TTTCCAGCGT (
6
)
5.6
0.0056
P10.5 crx- retina
GGAAAAAAAA (
69
)
3.7
0.0037
P10.5 crx- retina
GTTTATTTCC (
4
)
1.9
0.0019
P10.5 crx+ retina
GGAAAAAAAA (
69
)
15.4
0.0154
P10.5 crx+ retina
TAATGATTCT (
5
)
3.8
0.0038
P10.5 crx+ retina
GTGCTGGTTG (
6
)
1.9
0.0019
P10.5 crx+ retina
TACGGCGGTG (
6
)
1.9
0.0019
Adult retinal
GGAAAAAAAA (
69
)
5.6
0.0056
Adult retinal
TTTCCAGCGT (
6
)
3.7
0.0037
Adult retinal
TACGGCGGTG (
6
)
1.9
0.0019
ONL
GGAAAAAAAA (
69
)
17.2
0.0172
ONL
TAATGATTCT (
5
)
5.7
0.0057
ONL
TTCCTGAATT (
8
)
1.9
0.0019
ONL
TTTCCAGCGT (
6
)
1.9
0.0019
