Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35628
Fut8
fucosyltransferase 8
12
53618
Mm.35628
9530018F02Rik
RIKEN cDNA 9530018F02 gene
12
77402
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 80 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATCCTTCCCC
(
3
)
19.6
0.0196
P8 Cb GC
GACTGGTTCC (
6
)
11.4
0.0114
P8 Cb GC
GCATTGTTTT
(
9
)
1.6
0.0016
P8 Cb GC
TAGAGAGGAG (
3
)
1.6
0.0016
Cb medulloblastoma
AACAAATTCT
(
5
)
6.9
0.0069
Cb medulloblastoma
TGCACAGGCT (
6
)
2.3
0.0023
P8 GC+1d culture
ATCCTTCCCC
(
3
)
18.3
0.0183
P8 GC+1d culture
TAGAGAGGAG (
3
)
11.4
0.0114
P8 GC+1d culture
AACAAATTCT
(
5
)
6.8
0.0068
P8 GC+1d culture
GACTGGTTCC (
6
)
1.1
0.0011
P8 GC+1d culture
TGCACAGGCT (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
ATCCTTCCCC
(
3
)
31.6
0.0316
P8 GC+SHH+1d culture
AACAAATTCT
(
5
)
9.4
0.0094
P8 GC+SHH+1d culture
TGCACAGGCT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GACTGGTTCC (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TAGAGAGGAG (
3
)
2.3
0.0023
3T3 fibroblasts
TAGAGAGGAG (
3
)
7
0.007
3T3 fibroblasts
TGCACAGGCT (
6
)
7
0.007
E15 cortex
TAGAGAGGAG (
3
)
4.9
0.0049
E15 cortex
TGCACAGGCT (
6
)
4.9
0.0049
P1 cortex
TAGAGAGGAG (
3
)
18.2
0.0182
P1 cortex
GCATTGTTTT
(
9
)
4.5
0.0045
P1 cortex
TGCACAGGCT (
6
)
4.5
0.0045
Hypothalamus
AACAAATTCT
(
5
)
3.6
0.0036
Hypothalamus
TGCACAGGCT (
6
)
3.6
0.0036
Hypothalamus
GCATTGTTTT
(
9
)
1.8
0.0018
Hypothalamus
TAGAGAGGAG (
3
)
1.8
0.0018
E12.5 retina
ATCCTTCCCC
(
3
)
20.7
0.0207
E12.5 retina
TAGAGAGGAG (
3
)
7.5
0.0075
E12.5 retina
GACTGGTTCC (
6
)
1.9
0.0019
E12.5 retina
TGCACAGGCT (
6
)
1.9
0.0019
E14.5 retina
ATCCTTCCCC
(
3
)
5.5
0.0055
E14.5 retina
TGCACAGGCT (
6
)
5.5
0.0055
E14.5 retina
AACAAATTCT
(
5
)
1.8
0.0018
E14.5 retina
GACTGGTTCC (
6
)
1.8
0.0018
E14.5 retina
GCATTGTTTT
(
9
)
1.8
0.0018
E16.5 retina
ATCCTTCCCC
(
3
)
14.5
0.0145
E16.5 retina
GACTGGTTCC (
6
)
9.1
0.0091
E16.5 retina
TGCACAGGCT (
6
)
5.4
0.0054
E16.5 retina
AACAAATTCT
(
5
)
3.6
0.0036
E16.5 retina
GCATTGTTTT
(
9
)
1.8
0.0018
E18.5 retina
ATCCTTCCCC
(
3
)
10.9
0.0109
E18.5 retina
AACAAATTCT
(
5
)
7.3
0.0073
E18.5 retina
TAGAGAGGAG (
3
)
5.5
0.0055
E18.5 retina
GACTGGTTCC (
6
)
3.6
0.0036
E18.5 retina
TGCACAGGCT (
6
)
3.6
0.0036
P0.5 retina
ATCCTTCCCC
(
3
)
47.1
0.0471
P0.5 retina
TGCACAGGCT (
6
)
11.8
0.0118
P0.5 retina
TAGAGAGGAG (
3
)
9.8
0.0098
P0.5 retina
GACTGGTTCC (
6
)
7.9
0.0079
P0.5 retina
AACAAATTCT
(
5
)
2
0.002
P2.5 retina
ATCCTTCCCC
(
3
)
29.9
0.0299
P2.5 retina
GACTGGTTCC (
6
)
7
0.007
P2.5 retina
TAGAGAGGAG (
3
)
7
0.007
P2.5 retina
AACAAATTCT
(
5
)
1.8
0.0018
P4.5 retina
ATCCTTCCCC
(
3
)
17.8
0.0178
P4.5 retina
TGCACAGGCT (
6
)
7.9
0.0079
P4.5 retina
GACTGGTTCC (
6
)
5.9
0.0059
P4.5 retina
GCATTGTTTT
(
9
)
2
0.002
P4.5 retina
TAGAGAGGAG (
3
)
2
0.002
P6.5 retina
ATCCTTCCCC
(
3
)
51.7
0.0517
P6.5 retina
AACAAATTCT
(
5
)
3.3
0.0033
P6.5 retina
TAGAGAGGAG (
3
)
3.3
0.0033
P6.5 retina
GACTGGTTCC (
6
)
1.7
0.0017
P6.5 retina
TGCACAGGCT (
6
)
1.7
0.0017
P10.5 crx- retina
GACTGGTTCC (
6
)
11.1
0.0111
P10.5 crx- retina
ATCCTTCCCC
(
3
)
7.4
0.0074
P10.5 crx- retina
TAGAGAGGAG (
3
)
3.7
0.0037
P10.5 crx- retina
TGCACAGGCT (
6
)
3.7
0.0037
P10.5 crx- retina
AACAAATTCT
(
5
)
1.9
0.0019
P10.5 crx+ retina
ATCCTTCCCC
(
3
)
51.9
0.0519
P10.5 crx+ retina
AACAAATTCT
(
5
)
3.8
0.0038
P10.5 crx+ retina
GACTGGTTCC (
6
)
3.8
0.0038
P10.5 crx+ retina
TAGAGAGGAG (
3
)
1.9
0.0019
P10.5 crx+ retina
TGCACAGGCT (
6
)
1.9
0.0019
Adult retinal
ATCCTTCCCC
(
3
)
9.3
0.0093
Adult retinal
TGCACAGGCT (
6
)
7.4
0.0074
Adult retinal
GACTGGTTCC (
6
)
1.9
0.0019
ONL
ATCCTTCCCC
(
3
)
7.7
0.0077
ONL
TAGAGAGGAG (
3
)
1.9
0.0019
