Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35738	AI225934	expressed sequence AI225934	2		98884
Mm.35738	Catns	catenin src	2	2 47.8 cM	12388
Gene Ontology	cell adhesion | cytoskeleton | lamellipodium | membrane fraction | nucleus | protein binding | structural molecule activity
Human Homolog	CTNND1[catenin (cadherin-associated protein), delta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTTTGGGG (8) 1.6 0.0016 P8 Cb GC TGTTTTTAAA (6) 1.6 0.0016 Cb medulloblastoma TGTTTTTAAA (6) 2.3 0.0023 P8 GC+1d culture GGCTTTGGGG (8) 2.3 0.0023 P8 GC+1d culture TGTGGCTTGG (10) 2.3 0.0023 P8 GC+1d culture TGTTTTTAAA (6) 2.3 0.0023 P8 GC+1d culture GGCCTTGGGG (6) 1.1 0.0011 P8 GC+SHH+1d culture GGCTTTGGGG (8) 4.7 0.0047 P8 GC+SHH+1d culture TGTTTTTAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture CCTCCATTAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTTGGGG (6) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGCCTTGGGG (6) 3.5 0.0035 E15 cortex GGCTTTGGGG (8) 19.8 0.0198 E15 cortex GGCCTTGGGG (6) 14.8 0.0148 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GGCTTTGGGG (8) 4.5 0.0045 E12.5 retina GGCTTGGGGA (6) 1.9 0.0019 E12.5 retina GGCTTTGGGG (8) 1.9 0.0019 E14.5 retina GGCCTTGGGG (6) 5.5 0.0055 E14.5 retina GGCTTGGGGA (6) 1.8 0.0018 E16.5 retina GGCCTTGGGG (6) 3.6 0.0036 E16.5 retina TGTGGCTTGG (10) 1.8 0.0018 P0.5 retina GGCCTTGGGG (6) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GGCTTTGGGG (8) 2 0.002 P2.5 retina GGCCTTGGGG (6) 7 0.007 P2.5 retina GGCTTTGGGG (8) 3.5 0.0035 P2.5 retina TGTGGCTTGG (10) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGTTTTTAAA (6) 1.8 0.0018 P4.5 retina TGTTTTTAAA (6) 5.9 0.0059 P4.5 retina CCTCCATTAC (2) 2 0.002 P4.5 retina GGCCTTGGGG (6) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GGCTTTGGGG (8) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GGCCTTGGGG (6) 1.7 0.0017 P6.5 retina TGTTTTTAAA (6) 1.7 0.0017 P10.5 crx- retina GGCTTGGGGA (6) 1.9 0.0019 P10.5 crx- retina GGCTTTGGGG (8) 1.9 0.0019 P10.5 crx+ retina GGCTTTGGGG (8) 7.7 0.0077 P10.5 crx+ retina CCTCCATTAC (2) 1.9 0.0019 P10.5 crx+ retina TGTTTTTAAA (6) 1.9 0.0019 Adult retinal GGCTTTGGGG (8) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGCTTTGGGG (8) 1.9 0.0019 ONL TGTTTTTAAA (6) 1.9 0.0019