Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35764
1110003E08Rik
RIKEN cDNA 1110003E08 gene
5
68473
Mm.35764
B230364F10
hypothetical protein B230364F10
5
330118
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
AAACTTAAAA (
7
)
1.6
0.0016
P8 Cb GC
TGGCTACTGG (
7
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
CTGCTGCTAT
(
6
)
2.3
0.0023
Cb medulloblastoma
GTGGCCTGTG (
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TGGCTACTGG (
7
)
3.4
0.0034
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGGCTACTGG (
7
)
9.4
0.0094
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
CTGCTGCTAT
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCACATACA
(
6
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
TGGCTACTGG (
7
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
GTGGCCTGTG (
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
TGGCTACTGG (
7
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
TGGCTACTGG (
7
)
1.8
0.0018
E14.5 retina
TTCAAAACAA
(
8
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGGCTACTGG (
7
)
7.2
0.0072
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
CTGCTGCTAT
(
6
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGCTACTGG (
7
)
3.6
0.0036
E18.5 retina
AAACTTAAAA (
7
)
1.8
0.0018
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGGCTACTGG (
7
)
5.9
0.0059
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
GTGGCCTGTG (
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
AAACTTAAAA (
7
)
1.9
0.0019
P10.5 crx+ retina
TTCAAAACAA
(
8
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TTCAAAACAA
(
8
)
5.7
0.0057
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
TGCACATACA
(
6
)
3.8
0.0038
ONL
AAACTTAAAA (
7
)
1.9
0.0019
ONL
TGGCTACTGG (
7
)
1.9
0.0019
